Description

This region does not appear to regulate KH.C8.227.v1.C.SL1-1.

Coordinates are base on KH transcript model.

Hierarchy of Regulatory Regions

Regulated gene(s)

KH2012:KH.C8.227 (PDZRN3; PDZRN4; RNF151)

Construct(s) made to test this region

CONS00000251: KH.C8.227.v1.C.SL1-1 -129/34 pFOG::LacZ

Overview of functional TF binding sites in this region

4,571,6824,571,844

	Motif Name	Binding Factor(s)	Sequence	Position in Region	Comment
1	ZnF_(GATA)	n/a	GATA	[4,571,696 / 4,571,699]
2	Ets	n/a	TTCC	[4,571,727 / 4,571,730]
3	ZnF_(GATA)	n/a	TATC	[4,571,762 / 4,571,765]
4	ZnF_(GATA)	n/a	TATC	[4,571,773 / 4,571,776]
5	Ets	n/a	TTCC	[4,571,777 / 4,571,780]
6	Ets	n/a	TTCC	[4,571,804 / 4,571,807]
7	ZnF_(GATA)	n/a	GATA	[4,571,836 / 4,571,839]

Sequence

Aniseed Coordinates: [4,571,682 / 4,571,844] on scaffold KhC8

Sequence from JGI V1.0

Reference(s)

Khoueiry et al. (2010). A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites. Curr. Biol. 20(9):792-802