- Region 'REG00000306'
Cis-regulatory Region
Name
Ci-ELK -981/7393
Short name
n/a
Region ID
REG00000306
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
no_output
Author
Émilie Carmona (2007-12-06)
Annotator
Clara Degos (2010-07-12)
Curator
Delphine Dauga (2010-06-09)
Root region, untested.
Coordinates are based on the longest KH transcript model.
2,402,3422,410,714
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [2,402,342 / 2,410,714] on scaffold KhC8
Sequence from JGI V1.0
Show sequence
Length: 8,373
GCTTAAAAAATCTGTGCAGTCCTAAAATCAAGCGTTGCCGACCCCCACCAATTGCAACAG
GGAAATTTATATCTTTATTTAACCTAAAACTTTTTCGAGTGTTGTTATCGCCATTTACTG
TTTACATAATTCATCTTGATCAAGAAACTGTACCAGGGTAAACAATGGATTAGGTGCAGA
TTTAAAATCATGAGGTTGTAATAACAATGGAACAGACAGGAAGTCGTAAAAAAGCAAATA
TCCCAAAGCGCCATGGCCACGAGAGAAATCCGATGCGGTGGTGTAATTACCGTCCTACGA
CCACACGGGAGACAGCAGTCGTCCGCCGGAAAACGAGAAAGGCGTTTCGTGTAAGCAACA
AAGGGCCTTCTTTGCTACTCGCCTCTGTCCGTTCTTTGTTCGGGCGAACGAGCTTCAGTG
ATTTTGTTTGTGCATCCCGGCGCCGACTTCCGCCGACCGACGCGATAGCGCGCGGCGCGA
GAAAAAAGAGAAGGCGGATGTACAGATGTCTTTTAATTCCGGTTCTCTCTCGTATGGAGA
CCGCTTCTGTTTGTAACCCTATACTAGTGGCGTCTCAACAACAGCTCACAGTCGACCAGG
GTCGTGTCAGTAAAAGAAATCGTAAACGATACAATCACGCCCGTGAACCGGAGGCAGTGT
AGTAAACGAGCGTGGAGGCGGAAACTACGTAAATTGTTATCATCTTAAAACAGAACAGGC
CCAAGGCAAGAAAGGTTTTTACGGATAAGACAAATGACGCAATGGTATAATTACTCAGAA
ACGTCAGTGCGGTCTATAATGTACGTTGGCCTACACGGTTCAAAGTTGTGACGTCCAAGG
TATATAAGGGTTTTAGCACGGATGCCTATATCCGGGTTAGGCAAGCTGGGATATGGTTCA
GGTTCACGCTCTGTGTATAGAGCATAATTTGTTGTTTGAGCTGTGTTATACAAGCACATT
TGTAACTTGGTTTCTTCTTAGAGCAGAAATCGACGACACAGTAGTGCAAGAATAGGGTGT
GAAAATCAAAGATTACGTGTGTTGAAGTGAAGTAATTATTGCTCGGCTAATAAGGAACAC
GCTGCCGGGTATATTGCTTATCTGTTGGAAATGATGACATTGAAAATCGACACAGCCGAT
TTCGATCGCTCGTCCATAGAGCAACAACCACAACAAGACGGCAAATGCAATAACAGCGGT
CATAAATCAACGGAAACGCGTAACGTCACAGATTCCGCTGTTGAGAACGACAGGATTAAA
AGTTCGGACCCGGAGAAAGGTTTATTGGACCGTGAAAATGGTAAGTACGTGTAGCGTATT
GACACTTTTTACTCCAATGATTTCTTGTCAGCTTATCAACCCGTGTGCTGACGTGCAGGT
GTTTTTGATTGCGATTTATAGTTACATTCAGCGCTACGCGTCGTAAATAATTGACTAAGC
TTTCGCGTCACGAACCTCAACTTACGTCAGAACGCAAGGACAAAGCAGTCGGAAATAGAA
CCATTAACGGGCAGCGGAACATGCGAGCTCAATTAAATATAGAGCGGCTCAAGGGAACAC
ACCTAGAGGCCGTGCTGGTGCGGCTACTCGTGCGTGACGGTCGTCATCGTACTGAATGAA
TTACGAACGGAAGAGCGAGCTCACCGCTGGACAGAATTCCTCCTGATATTGCCTTTCATG
GACTTATTGACGGAGCGGTGGCAAGGAACCGAAAGGCGAAAGGTTGCTCGCGAGATAAAA
AAGAAACCAAGACGCTATACCGTCGGAGTGGGATGCTTTTACAATGACGCAATTGCTCTT
GGCTTCCGCCTCTCCATAGTTAGTTCCGGATTTGGTCGCTCCCCTTGTCGCACTGCCCGC
TTTCGCCGCCGTTTTGTTTCCTTATTATTCGGTCGCCAGACATCTGTTATATCCGACTAG
TAGCTGGGAGGCCATTAACCGCGCGTCGTAGTTAACACTCCACTACTTCCCTTAAACGGC
CGTAATTACCAGGGCGAGCAGCGGTCATCCGGATTTATGAGGGACTTGTCCTGATTATTG
CTCTCAGGGCCCGGAAGTGGCCTTTGCTGGCGCTGGGGACATAAACAAGAAAATCTAATT
AATTTGTACGCCGGAGCAAAACGACAAAGAGACTCTGATATCAGAGAAGCGATTTCAGAC
CGCCATGCCCACGCTTATGGTGATCTCATTTACATTTCAGCTGTCTTGCTTTGACCTTTC
ACGGCAGCGCACCGATGACGCAGGAGATTATATGACGTCGCTGCGATTTGACGTAATGAG
CAAGCTGGGTTTGAATAGCGCAAGTTAAATACGCGAACCCTTTCTCTATCTTGACGTTCG
AAATAGCCCCGTAATTTTTCATGTCAGGGCGTGGAAATCGCTGTTACTATACCGCACGTA
TTTGCGTCGTGACGCAATTCGTGCGTAAAAATAGCTCGAGATAAAAAGATGATTTAATTC
GGAGTTTCCTTCTTGGTTATTACACGAAAATATACTTGGCACAAGCGAGATAAGCGAATG
CATTATCGATTGCTGGGAATATAGTGACGCGCTCGTGCAACCGATGTCAGTGATAGATTG
CCAGCAAGCGCCGAACCAGCCAGTTTTATTGACCGCCACCGCATGAAAACTCTCCGATCA
CGTAATAAATCGATCGAAGCCGGTTTTCCGGTTCGAGATACACCCCTGCCAGCCCTGTGC
TGGCGCTCACGTTCTTGACCCCTCTACATCACTTGTTCCGCCTCTGGGTTGGTCCTCTGT
GACCGTGGGAGCGGAAGCGCAGCTCAAACTACCCGGAAGCAATGCAACGACACGGAAAAG
CTTGTTATTGCGTTCGATCATAACACCACGTTGTTTCCAATGGATTAGTTGCCTGCTTCA
CGGTCTGGTATGTCGGGCCCGACTTTCAAATGTTTACCAAACATCCTAATACTGATTTGC
CCTTATTCATCCCCATACAGCGCCATGGGTGGGACAATACAATCTTGGAGATTTTGTCAT
TCCAAAACTGACCTAAACGTTTTAAAATGATATCACAATTGATATGACTGCTTTTTGGCA
ACAATGCAGAACAGATTACCTAGGTTGGACATATTTAATTTAACGCAATTGGGCGCCGGG
TATACTCGTTGTTCCGATCTGTTCCCACGCTATAAAGAGCAGATGCCAGGAACTAACTGC
ATCCGGGTAGATAAGAGACCGTGTGTTTCGATGTTTCATATTCAAGAAAACAAAGGTTTT
ATTAAAAGATGGAGAAATCTAAAACAGAAAAGCGATTTTTACCGGGATTGTTTCGTTTAT
TGGTTTACCCTGTCGGCAAAATGTTGTTCCTATACAGTGCTAATATTAGGCAAGCGTAAA
TACGGAAGCCGAATCTGACGTAAATCGCTATACTCCATCGTTTTTTTTTACAAATACTTG
CGTTGCATGGCGGATATGAGAACATCACCCATTTACTTAGTTGTTTTTGTTGTTGCTATA
AACATGTGAGTCACGATGTATACCTGCAACCAACAACGGAGATCCCCACGCTGCCAATTT
CCGTGGCATGTCACATCTTTGTTTTACGTTCCTGTTTCGAAAACGCTCTGCTGATGGTAA
CTTCCACCGATTGTATTACGGGCTCGACCAATTCAGCAGACTGAGTGAGCTGCTTCCGGC
TAAAGCGCGAATAATAGCTTAAAGGGAAGAAACGCCGACTAACGGAAACGCAGCAAGCAC
TGTACAGTATGCTGCTGCTTGCTGCTGCTGAGTATCGAAAAGTAGCAAGCGATCAAACGC
CCTCTTATCCCTGGCCACACGCTTTAGGAATCGGTTGTTCTTGGATTAGCACGGTTCGAA
GCTGGAGTGCCGCAAATCAAACCGAATAATAAACTGATGTGAATATGTTTTGGGATTTAA
AGTCTAGCCACATATGAGCTAGAGATAATCTCGAATATATCTTCCGTTGTTTAGCATCCC
ATCCGTCACTTTAATGAACTGTCGTGGGGTCGGTTGGATCGTACGATGTGCTGGCTTCGA
TATGAACGGCGCCATAAACTTGTCCCGGCTACAAATTTACCGCGATTAGGCCATTTCAAA
GCGGAGTTAATTTCCTGGCAGACAGGCGCCGGGTCGCATGTACACTGTCGATCGCATTGG
TTATTACGATGGCTGGGTAACTGACAGTGACCGAGCGCCAGGCCCGATTTCAGTGGCGAA
AGTAACGCGCCCTGTGCTCGCTTCACCGACTGCTGACGTGTCTGGGGCCAAACGGAAACC
TGTCCCATTCGGACGGGTAGTGTTGTTGTTTCCGGCTGACGAGAAATATATCCTTGTCTC
TCGTTTCCGTGTGAGCGCATCTCGAAGTGCGAGCCGTGTGTTTTCTCCAACACTGAGATT
CATGCTGGTTCCGGGTTGGTGGTAAAAGTGGCGAGTATAGTACATAGTATAGGGTTGGAA
CAACACAGAACTGACGCCATACTGGTGCGATCTGCAGTTTTAACGTCTGTATTTGAACAA
GACCAGGTAGAAAGTCATTGTTTTCTGGAGGCCAAGGACACCTCACATATGGACACACAC
ACCAGACGGATTATTGGCACATTAGAACGCGCGCTCGCACACTCGCCTACCATGTACCCA
TTGACGCGGCTCTCGGAGCCGCTTCCTGATCGAGTAACGAGTCGTTTCCGCCTCATAGGC
TAGCGGGTCTGGTCCAGCGCAACAGGGCAAAAGAGAGTGCGAACGAGGGAAACAGTGGGA
GCTTTCCAAGCAGGTAAAGACCGAGCCTTAGGAAGATAGATACAAACCCTACAACACCAG
GAAACAACCGCAGAGGAAGCCCGGCCTGTTCCTTGAAAGGTTATGTATCATCTGCCGAGA
CAGTTTCTGAGCAATAAACCGCCATAGTGGCTTTGCACGTTGCCAGGATTGATGCAACGA
GTGCTGGGGACTGTATAGCACGGAAGCGGGAATAGAATCAACCGCTCACAGCTACAGGAA
GCAGTTAGTACTGCTGGTGAGCTCAGCTTTCAAAGACATTTTAACGTTATATTGAAAGGC
AGTTAAAGTGGTATAAGCATTTTAATATAATACCTAAAAGGAAAGTTACCTGCAAAGCTT
AATTCTTTAGCGGTTGCGGACGTTATTTAAAAAACTTTTTGCGATAAGGTGTTTACGCCT
TTAGGGTGAAAGTGCTTGTAGAATGTGTGTAAATGTAAACAAAATTCGGTAATGGGCAAT
TACATTTTAAACAGACGAAAGAAATTTCCATGCGTGTTGTTAGCGGGGAACTTGCATCCG
TCCTTATTGGTTCGATGAAACAACATAACCAATCAGAACGTCTGTAATTAATACTCGAAA
GGCGGTCTAAGCATCTGTAGTACAGGGTTTGTTATTTTCCTTGTCTGACAGGTTTGTGAC
AGGTCTGTACGAGCGCCGTCCTCTTTCCTAGAAAGATTTCTCCCTGTATACTACCACAAC
TATTTTGTAGGCGTCGACGTTAAAACAGCCGTAAGGAATTCTATCTTTGTAAAAGGCAAT
ATACAGATCGTGTTGCCAAAATATATGATTAAACCGGTCGTATTAGTTATTGTGTTAATT
GCTAATTACCCCGAGTATTTTGTAAGCATCCATCGCAAATCAGCCTTAGGTTATTTTATT
TGTGTAAAAGTCAAAGGCATGATGTATTGCGTATATCACACTTAACCAGTCGTATTAGTT
GTTGTGTTAATTCGCTGCTTTTGCTAATTGGATTTTGTTTTTATTTTTCATGTCGTTGCT
TCGGTGTCTGTTGTTAACTGAACTGTGCTGCAATTTGAAAATTGATTGATATTAGACGGT
TCCCCATCGTTGGATGAGCGTTCTTCGATGGTAAATATGGAGGAAATCGACATGCAAGCA
CCGCCTTCTGACAAGCGGCTGTGCCTTGCCAACATGCAGCAACTGGGAGCCCATTTACCA
AGAGGTAAGCATATTAAACAATGCGTTCTTATTCATTGTCGGATTAGTAAAGCCAAGTCT
TTGCGGTACGAATTTGTTGTCCAATATCGACCGGGCTATGCAGTTGCGTGATTAGTGTTT
ACCTTGTTAGTTGCGATTATGGTTTACGCGGAACAAAACCGATTGCCGTCATTGGGAGAA
AATCAAACTTGTCAGCAATCAGGGGCGACAAGCAAACATAGCTTATACAGCGTCATATAT
GGTCGTACTTAGTGTTCGTTGTCGCAATTTAATTACACATCAACATCGCTGTGGTCTTGG
TTGTCGCAGTCTAACCGCTTAGCAAATGCGACAGTCAAAGCCTCAACAAGTCCTGGGGTG
TTTGGTATGTCGTTCCGGCACGAAAAGCGTTCGCAAAGTGTTTGTTGCCTTGTGTATGGG
AAATACGCTTAGCAGTCCAGATGTTGGAACTGGAAAAGCGGTAGATAGCGTGGTGCAGTG
AGCGCTGCGGTGTCATGTTTTCATCATTCGCACAATCGTCGGAAACAGGCTCCAGGCCGA
ACAAGGCAACTGGAGCCAACACGCTAATTACAGCCGAATAGTGGCTTGACGTGAGTGTGC
CGTGCCTGGTCTTCATTAATAGAGCCTCCAACAAACGGGCTTGGTTGTGCGGCGAGTCAG
AGCGGAATTGCGGTGAGGTCTTTGTGCGGTGGCGCGGGGAAATGCATTATTGTCGATTAA
GAGCGGGTGCTCGCCTGTCTATCAATAGACGTACATCCGCCCAATCTTAGGCTGTGCATT
AACCGAGCTTCCACGATTTTCCATTGTTCGCGTAAAAGCCTGCACTCCCGTTCCTGCTGC
ATTTGCATTGAATGGCAACGAATGACGAAGCCTGGAGACAAATTCTTCACGATGCCACGT
CATTTGTCACACGGTTTCCGAAGCCAAATGCCTCTATCGCGACAGCGACGACGCAAACAA
ATAAAAACACCAAAACAGCCTCGTTTCCGGCCCCCGGATACCCCAGTCGCCACCTGAGCG
TTCCTACTTCTCCCAGCGCCCCGGCCTATCTCTCAGGTTTCGCTGGAAACGATACCTGCC
CGTGAATTTGGTTTCCACACGGTGTATGTAACTTGTTACGGCTTCAGATCCCGTGACCCC
CGCACTGTTTACCTTCGTTCTTAACCGTGGAACGACTTCGCGACGATTAGAGGGTTATAG
GGGACGCTTTTGATTTCTAGCGATTTTGTAAACAGTATTCGCACTGACCTCCCGCTGTTA
CGTCATGGCGATTCGAGTCAGTGTCCCCAAGTAGGTTTCCGGCAAGTGGCATCATGAAAA
AGTAATGATCTTTTGGTGGCAGGGTGCTGCTGAAGCAATTACCATCGTCTTTGTGCGCTG
GCTGGCTTATTAACCCGCGCCCCTGATCAATTACGTCGGCGCGGCTTCTTGCGTCGGTCA
ATAGGAACTTAATTGTGGGGTGGATGCGTCATTAAAGGATCTCGAAACCGGTAGATCGTC
GGCGGCCAGTGCACCAGTGTATTAATCCACGGAACAGCGAATTACCTGAGCCGAAACACA
CGGATTAAGTTACCTCCGGTTAAAACGCCCGGAAACCATAACGTGTATTCAACTGGGTCG
CATTTTCTCGCTTCTGTTCCTTTTCTTCGCGGTCGGTTCTATGATCCATCATCTGTCGCG
CGATATATCGACGACGCTATGTATTACGTCATATTCGGAACAATGGATGTACACAATATG
GGCGAGGCGCGAAACAAAGACGTCGCACAAGATCTTAGTCGTTCTTAACAAAGAACCTAT
CTTGTCCGACCTAATCCAAACATTACGACTAAACAGTCCAAATATATGACACTGACTCAT
TTGACCACGCGGTGCAATGCCGAGCGAGCGAACTCGGCTTATTCAGGCTATCCCACAAGG
TATAGTCACACTTTATTGGGTCACAGCCATCTTTATGTACGGCGATAAAACCGGGTTGAT
TGGGTGCTTGGGGTATTTGTTGAGTCACCATATACCATTCGGCGATGATTGCTAAGTAAT
TGTCTTAAAATAGGAGCAATTTGTTGTAGTTTCGCGAGTTGTAGCTTCCTTAATGTGTTT
TGTGTTTTGAAAGTGCTGCGTCGGTAAATCACAGCGGAATGCGAAACTAACATTGTGTGG
TGGGGTGGGGAAAGGCCTGCTTAGTTCAGTAGTGTTGCTTCTTTAACATGGAATCTATTC
CCCGTGACGATGAGATAAGGACAAGCGGAAACCGACCAACGCGTATTTCGAGAACTATTT
ATCTTGACTGATTCCTGTTCCTTCCTTTCCTTCCGCCCGCAGCTTACCGGTAAACAAGCG
CCTGCCGTACCCCGCTGAACCGACATTGCCAGCATAGCAAACGCCCATAGCAAAATCGAA
AAGTATGCCGCCCACCCATAAGGAAGCCGGAAT
