- Clone 'cijv032e23' >
- Region 'REG00000308'
Cis-regulatory Region
Name
Ci-FoxC -1023/-71
Short name
n/a
Region ID
REG00000308
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
regulatory_region
(extended_promoter)
Author
Yukio Ohtsuka (2007-12-06)
Annotator
Émilie Carmona (2010-06-09)
Curator
Patrick Lemaire (2012-03-20)
This region is active by the early gastrla stage in the anterior part of the brain and in palps.
Coordinates are based on KH transcript model.
97,11398,064
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [97,113 / 98,064] on scaffold KhL57
Sequence from JGI V1.0
Show sequence
Length: 952
CTTCCCTCACAACACTCGCACTGCCTTCGTGTCAATAATCGAATGTTTTCTGCCGGTACC
TGCCCACGACCGAGTCGAGCCTGAGCGAAGGTAAAAAGTTCATCTTCCCCTTAAACAATG
GAAAGCAGGAGCGTCATAATCCCAATCAACTTTCGCGAGGAACAATGGCGCGCTAATGAT
GCAGTAATTAGATCGTGTTTTGACAAGCTCTAAGTAGAGAACTTGGCACGCGCCGCCTTA
CGAAACACCTGCTGACACCGCTCACTATGGAGCCTTACCCAATAGCCCTGTTTATATAAA
CCACAACTTTTAAATTAATCTCTCAATCTTGGAACTTTTTAACTCCAACGTTCATTAAAA
ATGGCGGTTAACGTTCACCGTTGATATTCAGCGGTTATAACTGAAGCTGCCTCTCCTGTC
CGAACCTTGTCACGACCCGATCAGTTTACAGCGTGACTCCTCGGGTTGCTGTTTATAAAT
AAGAGATGTAACCGAAGAGTTTTTTGCGGTAAAACTCGACTTTTTGAAACGAGCGAGACC
GGTTGGCTCAGCAGCGACACCATGCGGAAATTTACACGCGCAGCATTTTCCGTGACTCGC
TATACAATGAGTTATGCAACTAAGGCGGCAACTTAGGCGTCGATGATTCATATTTTCCTG
GAGCATTTAGCTTAAGGTTTCCCCACCCACCATAGCTTCGTTTTATTAAATATATTGGAC
ATTTTTACTTAGTTTTTTTTTACCTTCATAGCGTATTTTTAACAAGTGTAGTTTTGTTGC
TGATTCTCTTGGTTTGCTATTTCAATTAATCTTATTTTTGTTTCTGTATTTAAATAGCTA
AACAACAGTTTAAGTTATGTTATATTGCGTTTGGTATAGTAACTAACTTGGCCTTGAAAA
AAGTAAAGGGAATTAGCAAAACGACGTTAACGAGTAGGATTGAAAAATGAAA
