Description

This region, placed upstream of the pfog basal promoter, drives expression in mesenchyme in larvae stage.located in between two genes: orphan Fox1 and Latrophilin-3 precursor-like

Coordinates are based on JGI transcript model.

Hierarchy of Regulatory Regions

Regulated gene(s)

KH2012:KH.S696.1 (GATA2; GATA3; GATA4)

Construct(s) made to test this region

CONS00000323: Ci-orphanFox1 -3554/-3273 pFOG::LacZ

Overview of functional TF binding sites in this region

3,475,1373,475,417

	Motif Name	Binding Factor(s)	Sequence	Position in Region	Comment

Sequence

Aniseed Coordinates: [3,475,137 / 3,475,417] on scaffold KhC14

Sequence from JGI V1.0

Reference(s)

Khoueiry et al. (2010). A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites. Curr. Biol. 20(9):792-802