Description

This region, placed in front of the pfog or pbra bsal promoters, drives expression in different territories. This may all be backgroud.

Ci-PTFb -1665/-1407 pFOG::LacZ: weakish expression in mesenchyme, endoderm and muscle.

Ci-PTFb -1665/-1407 pBra::LacZ: weakish expression in notochord, mesenchyme, tail tip muscle or epidermis.


Coordinates are based on KH transcript model.

Hierarchy of Regulatory Regions

Regulated gene(s)

KH2012:KH.S816.1 (ZIC2; ZIC3; ZIC4)

Construct(s) made to test this region

CONS00000330: Ci-PTFb -1665/-1407 pFOG::LacZ

CONS00000331: Ci-PTFb -1665/-1407 pBra::LacZ

Overview of functional TF binding sites in this region

711,828712,085

	Motif Name	Binding Factor(s)	Sequence	Position in Region	Comment

Sequence

Aniseed Coordinates: [711,828 / 712,085] on scaffold KhL116

Sequence from JGI V1.0

Reference(s)

Khoueiry et al. (2010). A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites. Curr. Biol. 20(9):792-802