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  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'KH2012:KH.S544.3.v1....'
  3. Transcript 'Cisavi.CG.ENS81.R0.2...'
  4. Transcript 'Boleac.CG.SB_v3.S58....'
  5. Region 'REG00000372'

Cis-regulatory Region

Name

Ci-fog -290/1

Short name

n/a

Region ID

REG00000372

Status

Curated

Origin

natural region from C. robusta formely Ciona int. type A

Type of Activity

regulatory_region
(extended_promoter)

Author

Ute Rothbächer (2008-02-25)

Annotator

Clara Degos (2010-07-22)

Curator

Delphine Dauga (2010-02-24)


Description

Construct(s) made to test this region

CONS00000362: pfog -290/1::NLS-LacZ

Overview of functional TF binding sites in this region

1,827,5031,827,792

Motif Name Binding Factor(s) Sequence Position in Region Comment

Sequence

Aniseed Coordinates: [1,827,503 / 1,827,792] on scaffold KhC10

This sequence was based on JGI Version 1.0.

Show sequence

Length: 290

CATTATGTGTGTTATTTTTGTATAGACCTGAAACAAAAATACTTTCTTGGAAAAGCTGTT
GTTGGCCAACTATTTAAATGAACTTACTGTGACCACCTGCCTTGTCAGCTGAGATTAATG
TCTCTCTACTTTAGAGTTTTAATTTAAACTGCCTTCTTCTCTTGTCAATATAATATCAAG
TTTGCATGATTGACAATGGGTCGGTACAATACACGAAGCTTATTCACTATCAGAGTTTAA
CTGAACACAAGAGCTTTGGAGCTTCGGTCTTGGACCGTTTCCTGAATTTT





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