Description

- +1 is based on the start of the first exon of the KH transcript model


- This region showed an activity in muscle precursors recapitulating the activity of the endogenous gene, WNT5

Hierarchy of Regulatory Regions

Regulated gene(s)

n/a

Construct(s) made to test this region

CONS00000428: Wnt5 -784/-664 pFOG::LacZ

Overview of functional TF binding sites in this region

45,35845,477

	Motif Name	Binding Factor(s)	Sequence	Position in Region	Comment
1	Ets	n/a	ATCC	[45,360 / 45,363]
2	Ets	n/a	GGAA	[45,383 / 45,386]
3	ZnF_(GATA)	n/a	TATC	[45,392 / 45,395]
4	Ets	n/a	TTCC	[45,401 / 45,404]
5	ZnF_(GATA)	n/a	GATA	[45,427 / 45,430]
6	Ets	n/a	GGAT	[45,442 / 45,445]
7	Ets	n/a	GGAT	[45,461 / 45,464]

Sequence

Aniseed Coordinates: [45,358 / 45,477] on scaffold KhL152

Genomic sequence - for cloned sequence, check the sequence of the tested construct

Reference(s)

Khoueiry et al. (2010). A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites. Curr. Biol. 20(9):792-802