Description

This region does not appear to regulate ci0100145875.

+1 is based on the start of the first exon of the JGI transcript model (No other transcript model exists).

Hierarchy of Regulatory Regions

Regulated gene(s)

KH2012:KH.C9.176 (NOTCH1; NOTCH2; NOTCH3)

Construct(s) made to test this region

CONS00000430: ci0100145875 2469/2603 pFOG::LacZ

Overview of functional TF binding sites in this region

718,295718,428

	Motif Name	Binding Factor(s)	Sequence	Position in Region	Comment
1	Ets	n/a	GGAA	[718,300 / 718,303]
2	ZnF_(GATA)	n/a	GATA	[718,319 / 718,322]
3	Ets	n/a	GGAA	[718,352 / 718,355]
4	Ets	n/a	TTCC	[718,375 / 718,378]
5	Ets	n/a	TTCC	[718,395 / 718,398]
6	ZnF_(GATA)	n/a	TATC	[718,401 / 718,404]
7	Ets	n/a	ATCC	[718,408 / 718,411]
8	Ets	n/a	GGAT	[718,416 / 718,419]

Sequence

Aniseed Coordinates: [718,295 / 718,428] on scaffold KhC5

Sequence from JGI V1.0

Reference(s)

Khoueiry et al. (2010). A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites. Curr. Biol. 20(9):792-802