Description

This region does not appear to regulate Ci-Ends2.

Transcription start site is based on the start of the first exon of the KH transcript model

Hierarchy of Regulatory Regions

Regulated gene(s)

KH2012:KH.C8.352 (KH.C8.352)

Construct(s) made to test this region

CONS00000439: Ci-Ends2 -7852/-7993 pFOG::LacZ

Overview of functional TF binding sites in this region

3,390,7993,390,939

	Motif Name	Binding Factor(s)	Sequence	Position in Region	Comment
1	Ets	n/a	GGAA	[3,390,813 / 3,390,816]
2	Ets	n/a	ATCC	[3,390,827 / 3,390,830]
3	ZnF_(GATA)	n/a	TATC	[3,390,841 / 3,390,844]
4	Ets	n/a	GGAA	[3,390,900 / 3,390,903]
5	ZnF_(GATA)	n/a	GATA	[3,390,909 / 3,390,912]

Sequence

Aniseed Coordinates: [3,390,799 / 3,390,939] on scaffold KhC8

Sequence from JGI V1.0

Reference(s)

Khoueiry et al. (2010). A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites. Curr. Biol. 20(9):792-802