Description

This region does not appear to regulate ci0100139092.

- Transcription start site is based on the start of the first exon of the KH transcript model

Hierarchy of Regulatory Regions

Regulated gene(s)

KH2012:KH.C10.571 (KH.C10.571)

Construct(s) made to test this region

CONS00000442: ci0100139092 897/1026 pFOG::LacZ

Overview of functional TF binding sites in this region

3,605,2283,605,356

	Motif Name	Binding Factor(s)	Sequence	Position in Region	Comment
1	ZnF_(GATA)	n/a	GATA	[3,605,242 / 3,605,245]
2	ZnF_(GATA)	n/a	TATC	[3,605,254 / 3,605,257]
3	ZnF_(GATA)	n/a	GATA	[3,605,256 / 3,605,259]
4	Ets	n/a	GGAT	[3,605,257 / 3,605,260]
5	ZnF_(GATA)	n/a	GATA	[3,605,269 / 3,605,272]
6	Ets	n/a	GGAA	[3,605,300 / 3,605,303]
7	Ets	n/a	GGAA	[3,605,328 / 3,605,331]

Sequence

Aniseed Coordinates: [3,605,228 / 3,605,356] on scaffold KhC10

Sequence from JGI V1.0

Reference(s)

Khoueiry et al. (2010). A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites. Curr. Biol. 20(9):792-802