Description

This region does not appear to regulate Ci-Chromosome-associated kinesin KIF4A like.


- Transcription start site is based on the start of the first exon of the KH transcript model

- Part of the element is coding according to ESTs

Hierarchy of Regulatory Regions

Regulated gene(s)

KH2012:KH.C4.707 (C16orf96; MYH7; QRICH2)

Construct(s) made to test this region

CONS00000445: Ci-Chromosome-associated kinesin KIF4A like 655/778 pFOG::LacZ

Overview of functional TF binding sites in this region

980,038980,160

	Motif Name	Binding Factor(s)	Sequence	Position in Region	Comment
1	ZnF_(GATA)	n/a	GATA	[980,056 / 980,059]
2	Ets	n/a	GGAT	[980,062 / 980,065]
3	ZnF_(GATA)	n/a	TATC	[980,108 / 980,111]
4	Ets	n/a	TTCC	[980,126 / 980,129]
5	Ets	n/a	TTCC	[980,138 / 980,141]

Sequence

Aniseed Coordinates: [980,038 / 980,160] on scaffold KhC14

Sequence from JGI V1.0

Reference(s)

Khoueiry et al. (2010). A cis-regulatory signature in ascidians and flies, independent of transcription factor binding sites. Curr. Biol. 20(9):792-802