- Transcript 'KH2012:KH.S544.3.v1....' >
- Transcript 'Cisavi.CG.ENS81.R0.2...' >
- Transcript 'Boleac.CG.SB_v3.S58....' >
- Region 'REG00000372' >
- Region 'REG00000683'
Cis-regulatory Region
Name
Ci-AChE -1649/1
Short name
n/a
Region ID
REG00000683
Status
Curated
Origin
natural region from C. robusta formely Ciona int. type A
Type of Activity
inactive_region
Author
Yumiko Kataoka (2010-06-01)
Annotator
Delphine Dauga (2010-06-01)
Curator
Delphine Dauga (2010-06-16)
Coordinates are based on the KH transcript model (coordinates in the paper : -1631bp).
5,022,8725,024,520
Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
---|
Aniseed Coordinates: [5,022,872 / 5,024,520] on scaffold KhC12
Sequence from JGI V1.0
TCTGTTCAAGAAAATAGAATAAAGTGTTATTAATTTACATATTTCTCTGAAAATTAAATA
TTAATCTACATGCAGTGTATAGGGCTCAATACATGGTAGAGTGGTAGGAAATGAGACACT
CTTTCAATCTGTTTTTTTCGTCCCACTTGGTAGTAAACAAAGAAAATGCAAAGAGTTATA
AAACCGTATCATCACGACTCCGATAGACTGTTGTTAGTTGTTTAAAACACGATCAGGATA
TTACGAGCTAAAGGTGTCCCATCTTCCCCCACCCTACTATACCAATAGAAAAAGTTCAAA
AATTGACTATTCCTTTTTCGAAGGTCGGGTTAAAATGACCGACAAGGATAATTAGCCTAA
CAGGTTTACAGAGAGTCGTGTCTATTGTTTAAATCATCCACACCGGTAAAATACACGACC
TTGCACAATAGGGGTAAATAGCGATACCTTGTTATTGTTGAAACTTAACACCGAAATGAA
CAAATTGATTGTAATTTACTTCCTCCTTTAAAAACCATTTTAATTACGTAATTTTATATT
TAACAACGAAAATTTTATGGCAAATACCAGACATTCCATCGCAGTTTAAGTTTTTATCTC
ACATTTCCTATATTCTAATATCTAAAATATATTCCTATATTCTAATATCTAATATATACA
ATTTCAGAGTATATACAAATTTTCAAATACAGTCATTGTAGCGTACCGTTAAGTTTCTAT
TTTAAATTTCTTAAATTCTTTTATCAACAGTTTTATGACAAACGCCACACATTGCTATGC
TGTCAAGTTTATACTTTACTTCGTACACCAAACGCCTCGCCACTTTAACTCAACCGCGAA
ACAACCGATCCATTCCAACCAAACTCTGTAATTCACTTTTAGTTTTTGAACTGCCTGTCG
GCCTAAATTTGCGATTTTGTTTGATAACAACAAATTTCTTATATTAGTCTGCAAACCCGT
GACCGACCTAAAGCTGCCAATTTCTGCAAGAGCGTGGTTTATATATCAGTGCTTGTGGAA
CGGGAGACGGGGCTAATTGGCCTAAACTGAAAATTGAATTGACGCGGCCATGCAGGGGAT
CGATAATCAGTAAAAGCATCCGTCGTTTCTATCTGCCCAGCTGGGATACTGAAATTTTTA
CAAAGTGGAACGAAAACGAATTTGAACACACGAGGATGAATTATTGAAGCAGCACGCCTA
ATGACAAGCCTCGTGAAGGTAAAGTTGTAGTTGGATTAAACCAATCAAGGCTATACCTGG
TACTCTCAAACTATTGATTCGACAACATTGATTCAAAACCTATATCTCTGAGTGCTACAA
TTACTTAGATTACATCACCACACGTATAGCTGACCTGCTACCATGGAAAGATATATATAA
CTACACAGCAACTCCGTCCCTACATTAATCAACACTCCACGCTGCTACCGTAATATAACC
TGCGTTTCCTGCAATGCTTCTGTTCTCTGCTCAACCCTTTACACTATACAGCGGGCGACA
TTGCCACTATCTACCTTATAGATTGCGAACTATCACAACAAGACTGTGTCTTGGGAATCA
AGCGTCCGCAACGCTCTCGTAGTAGAGGCGAACTTACGCTGCTTTCTCAACGCTACAACT
TTATCCACGAAAGAAAAAGGAGAAAGGCA