- Molecular Tool 'BIO' >
- Transcript 'KH2012:KH.C13.27.v3....' >
- Transcript 'Moocci.CG.ELv1_2.S65...' >
- Transcript 'Cisavi.CG.ENS81.R54....' >
- Region 'REG00001468'
Cis-regulatory Region
Name
Phmamm.REG.CG.MTP2014.S14:106625-107597|Tolloid
Short name
n/a
Region ID
REG00001468
Status
Curated
Origin
natural region from P.mammillata
Type of Activity
regulatory_region
(extended_promoter)
Author
Damien Gailly (2018-06-08)
Annotator
Marion Gueroult-Bellone (2018-06-08)
Curator
Marion Gueroult-Bellone (2018-06-08)
This 973bp sequence, located upstream of Tolloid (S14.g00600), drives reporter gene expression in endoderm.
CONS00001490: p.Phmamm.REG.CG.MTP2014.S14:106625-107597>LacZ
106,625107,597
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [106,625 / 107,597] on scaffold S14
This sequence was retrieved using ANISEED Blast tool. Primer used for cloning : Forward : aacaatccaaatttgataaactgaa Reverse : aaatagacagtcggcttgtgg
Show sequence
Length: 973
aacaatccaaatttgataaactgaacttagtgtttacagcaagtaagtgctgcaaatgtg
cgatcttttttacaaaaaaatatgttttacagcctcaagcaattttaaaacaacattttt
tttctgcgtagcatcaagtggtaatgcccgtttttggggacgtttgtgcgcaatctctgc
aacattgaagatggatttaatgataaccctaaaccgctatgtacaaggcttgacaaatta
ctcatatattgtggcaacacagtgtggcttaagtcctggaaatgtcaaaatctgatgcca
tcttatcagctaggagtttttacaacgtttactggagtgacaaccctgaaggcaaagcga
acaacctaaactgagagatacaatctaggttacggacgacattatcggaacagcgtactg
caaattcttgtgtactcctcgcatatatttactggtgtcatgaatgtcatactaaaccac
accttatgtgttgcgacacgttatctctgtgctaacctcttacctaatggacaaaacaag
ctatgtaacctctaattctgcgtggacataacacactggcacaatactggtccactgtag
actgtacagtgtttcagttaaaactgatttacgccacaggaaagactagcgatataaacg
cggggcataaaagacttcggctggatgtttgtccttctcatataacttcgcaccaagcag
tcgctcaagaccaaaccgtctttttgaagctccaagttgtttgattaccgaacaagtctg
tcgcgggccgatgcaagcgcgccagataaaggagaagaaaaaagcacgactgcattatgc
ccagcttgtttaccttatcgcttccaatcatagatatttaagttcgtttcagatttcagc
aggtgcgaaaatgctgtgatggaatttaatcgcgtttatatttaataagttaccacaagc
cgactgtctattt
