- Clone 'AHC0AAA222YL18' >
- Transcript 'KH2012:KH.C5.544.v1....' >
- Clone 'cien54249' >
- Region 'REG00001273'
Cis-regulatory Region
Name
Moocci.REG.ELv1_2.S456097:79379-80469|FoxF
Short name
Moocci FoxF (-1517/-425)
Region ID
REG00001273
Status
Curated
Origin
natural region from M.occidentalis
Type of Activity
regulatory_region
(enhancer)
Author
Alberto Stolfi (2017-11-22)
Annotator
Marion Gueroult-Bellone (2017-11-22)
Curator
Marion Gueroult-Bellone (2017-11-22)
The larger region contains the basal promoter and the TSS.
CONS00001282: p.Moocci.REG.ELv1_2.S456097:79379-80469>mCherry
79,37980,473
| Motif Name | Binding Factor(s) | Sequence | Position in Region | Comment |
|---|
Aniseed Coordinates: [79,379 / 80,473] on scaffold S456097
1.1kb enhancer of FoxF, located -1517/-425 from the TSS. Sequence given by the authors.
Show sequence
Length: 1,105
5’TTGTCGTACGACCACTTAGCTTAATTACTACGTATTAACGAATAATAGTAAC
CAGTAAGTGCTTTAATCACAGGACACCTATTAATTAATGGTGAAGGGCGTTATATCTCAT
TAAGGCGGAGTTCTCTGAACTTTTAATTCCTAATATAACTTTCTATATACCTGGTTCCGT
TAATCTGCGGTTTTTTAAATAATAAAAAAGTTCAAGGTTCAAAAATTCAGGTGAAGAGTT
TTATGACTTGTTTTTCAGAAATGTTTGTTAATGATTTTTATGGCTAGTGACGTCACACCA
TCTATTTTCATACAGTAAAATTTAGCAACGTCAGCGAACGAGTAACAGGCAGTAAAACGT
CGTTAATATTCTCCTACATTGGAGCAATTAGCAGATACATTGGGTCGGAAGGGTGACCAC
ATTAAACCTAGGTTCAGTCCAGTGTCATAGTCGGTACGTTCGCGGAAGAACTAATTAACG
CGAGCGGATAATAAAACTGGCGGCGCAGTGGAGCGACGAATATTTGAGTTCTGTATCAGC
ACAGATCCGTGCAAAAAAATGCGTAGTAAAGAAAAAGCGTCGGATTTGGTAAAGTCTCGT
CATCGAGATATGTAATTTTGCGATGAGTAGTTCATATTCATTATCTTCCCGATAGGTGCG
ATATAGTGGTGTAGATTTAAAGAGAGATGAAATAATATTGTTTACGACGTAATGTAAACT
AGTTGGAATGTTTATTTACCAACAAGAATTTACGCTGGATATATAAGATTATAGTTTACA
CTGTATATAAACAATAAAAAAATTGGAAACATTTTAAAGAAAAGTATAAATTTTCTAAAG
AAGTTGATTTTTAGGGGAGTAATATCTCAATTTTGTTAATTTTTATTGGTCCAAATATAT
TTCAAATTAGACGCATTAGAAATAATTTTCGCCCACTTCGCAATATGTTAAATTAGATTT
TAATTTAACCGGTAAGCGTTTTGGTCAAAACAGGGCAGGAAATTTAGGGACCTGTGTTTA
TTGTTGATTCGCAGTATATGACCGATATAGTATTAAAAGAATATTCCACGAATATAATTT
GCAGTATCAGTCAGTTTCGAC
