- Construct 'CONS00000638'
Construct
ID
CONS00000638
Name
pCi-RhoD 565/989 FoxF2/3/4 mutated pFOG::LacZ
Min Promoter
Reporter
Comment
the second, third, and fourth FoxF sites were mutated and these mutations cause a reduced RhoD expression in B7.5 lineage.
Be careful, coordinates in the paper are different from ANISEED coordinates. We took the KH transcript model as reference.
Coordinates in the paper : +498/+922
The second, third, and fourth FoxF sites mutated were remplaced by "-".
Transcription start site is based on the start of the first exon of the KH transcript model.
Show sequence
Length: 424
ACTAAATTTAATTAGCAACCCGCTGTTGTTCAAAGGTGTACACGCCCACGGTGTTTGAGA
ATTACAGCAGAGAGGTGGAATTAAATCGAAAGAAGGCGGTGCTAACATTGTGGGATACGG
CGGGTATATATTAGTACATACG-------GCAAGACATCGTAGGCTTGTTGACTTAGTTT
CGGTTAGCATGGAAGTGTAGTCTATGTTCTACGTGGGTTATGTTCTTGTCGAGGATCTGG
GATTAGGGCTAAATTCAGCCTATTATTACCACAACATTCAGACTGCTTTTGTAGGTCCAA
ATGTAACATATGACTAGTGTGTTCTGATGTG-------AATACAATAAACTAGCGCAAAC
-------CCCATTATGTTTAGTCATATAGGTCATATGAGAGTAAATGAAGTGTAAACCAA
ATGT