Aniseed - Gene card

Gene Card

Best human hits

SHANK1; SHANK2; SHANK3

Species

B.leachii

Unique Gene ID

Boleac.g00000034

Gene Model ID

Boleac.CG.SB_v3.S0.g00034

Location

S0:301331..316064

Transcript Models and Sequences

Boleac.CG.SB_v3.S0.g00034.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
PDZ_sf	SUPERFAMILY	PDZ superfamily
SAM	SMART	Sterile alpha motif domain
PDZ	Pfam	PDZ domain
PDZ	ProSiteProfiles	PDZ domain
SAM	Pfam	Sterile alpha motif domain
SAM	ProSiteProfiles	Sterile alpha motif domain
SAM/pointed_sf	SUPERFAMILY	Sterile alpha motif/pointed domain superfamily
PDZ	SMART	PDZ domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

36 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
photoreceptor outer segment	Hs	cellular component	120	2.38e-27
photoreceptor inner segment	Hs	cellular component	120	2.38e-27
protein binding	Hs	molecular function	120	2.38e-27
intracellular	Hs	cellular component	116	3.12e-26
cytoplasm	Hs	cellular component	120	2.38e-27
cytosol	Hs	cellular component	120	2.38e-27
neurofilament	Hs	cellular component	120	2.38e-27
plasma membrane	Hs	cellular component	120	2.38e-27
protein C-terminus binding	Hs	molecular function	116	3.12e-26
ionotropic glutamate receptor complex	Hs	cellular component	120	2.38e-27
postsynaptic density	Hs	cellular component	120	2.38e-27
membrane	Hs	cellular component	120	2.38e-27
apical plasma membrane	Hs	cellular component	120	2.38e-27
SH3 domain binding	Hs	molecular function	120	2.38e-27
NMDA selective glutamate receptor complex	Hs	cellular component	116	3.12e-26
cell junction	Hs	cellular component	120	2.38e-27
receptor signaling complex scaffold activity	Hs	molecular function	116	3.12e-26
GKAP/Homer scaffold activity	Hs	molecular function	120	2.38e-27
dendrite	Hs	cellular component	116	3.12e-26
growth cone	Hs	cellular component	120	2.38e-27
brush border membrane	Hs	cellular component	120	2.38e-27
somatostatin receptor binding	Hs	molecular function	116	3.12e-26
ionotropic glutamate receptor binding	Hs	molecular function	120	2.38e-27
identical protein binding	Hs	molecular function	116	3.12e-26
cell projection	Hs	cellular component	120	2.38e-27
neuron projection	Hs	cellular component	120	2.38e-27
neuronal cell body	Hs	cellular component	120	2.38e-27
dendritic spine	Hs	cellular component	120	2.38e-27
neuron spine	Hs	cellular component	106	3.51e-23
macromolecular complex binding	Hs	molecular function	116	3.12e-26
synapse	Hs	cellular component	120	2.38e-27
postsynaptic membrane	Hs	cellular component	120	2.38e-27
excitatory synapse	Hs	cellular component	116	3.12e-26
ciliary membrane	Hs	cellular component	120	2.38e-27
ankyrin repeat binding	Hs	molecular function	116	3.12e-26
scaffold protein binding	Hs	molecular function	116	3.12e-26

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Pfam	molecular function	2.8E-17