Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

FMR1; FXR1; FXR2

Species

B.leachii

Unique Gene ID

Boleac.g00000990

Gene Model ID

Boleac.CG.SB_v3.S11.g00990

Location

S11:338555..341697

Transcript Models and Sequences

  Boleac.CG.SB_v3.S11.g00990.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
KH_dom SMART K Homology domain
Agenet-like_dom ProSiteProfiles Agenet-like domain
KH_dom_type_1_sf SUPERFAMILY K Homology domain, type 1 superfamily
FXMRP1_C_core Pfam Fragile X-related 1 protein, C-terminal core
KH_dom_type_1_sf Gene3D K Homology domain, type 1 superfamily
KH_dom_type_1 Pfam K Homology domain, type 1
Agenet-like_dom Pfam Agenet-like domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

72 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromosome, centromeric region Hs cellular component 366 1.15e-119
G-quadruplex RNA binding Hs molecular function 435 1.58e-146
nucleic acid binding Hs molecular function 435 1.58e-146
chromatin binding Hs molecular function 366 1.15e-119
RNA binding Hs molecular function 435 1.58e-146
mRNA binding Hs molecular function 435 1.58e-146
mRNA 3'-UTR binding Hs molecular function 435 1.58e-146
protein binding Hs molecular function 435 1.58e-146
nucleus Hs cellular component 435 1.58e-146
nucleoplasm Hs cellular component 366 1.15e-119
chromosome Hs cellular component 366 1.15e-119
nucleolus Hs cellular component 435 1.58e-146
cytoplasm Hs cellular component 435 1.58e-146
cytosol Hs cellular component 435 1.58e-146
polysome Hs cellular component 435 1.58e-146
mRNA cap binding complex Hs cellular component 366 1.15e-119
plasma membrane Hs cellular component 366 1.15e-119
microtubule binding Hs molecular function 366 1.15e-119
poly(U) RNA binding Hs molecular function 366 1.15e-119
chromocenter Hs cellular component 366 1.15e-119
cytoplasmic stress granule Hs cellular component 366 1.15e-119
postsynaptic density Hs cellular component 366 1.15e-119
Cajal body Hs cellular component 366 1.15e-119
membrane Hs cellular component 435 1.58e-146
viral replication complex Hs cellular component 366 1.15e-119
extrinsic component of plasma membrane Hs cellular component 366 1.15e-119
cytosolic large ribosomal subunit Hs cellular component 414 7.89e-138
cell junction Hs cellular component 366 1.15e-119
translation repressor activity Hs molecular function 366 1.15e-119
axon Hs cellular component 435 1.58e-146
dendrite Hs cellular component 435 1.58e-146
growth cone Hs cellular component 366 1.15e-119
intracellular ribonucleoprotein complex Hs cellular component 366 1.15e-119
translation initiation factor binding Hs molecular function 366 1.15e-119
filopodium tip Hs cellular component 366 1.15e-119
SMN complex Hs cellular component 366 1.15e-119
RNA strand annealing activity Hs molecular function 435 1.58e-146
poly(G) binding Hs molecular function 366 1.15e-119
methylated histone binding Hs molecular function 366 1.15e-119
siRNA binding Hs molecular function 366 1.15e-119
miRNA binding Hs molecular function 366 1.15e-119
RNA stem-loop binding Hs molecular function 366 1.15e-119
ribonucleoprotein granule Hs cellular component 435 1.58e-146
cytoplasmic ribonucleoprotein granule Hs cellular component 366 1.15e-119
presynaptic membrane Hs cellular component 366 1.15e-119
polysomal ribosome Hs cellular component 366 1.15e-119
identical protein binding Hs molecular function 414 7.89e-138
protein homodimerization activity Hs molecular function 435 1.58e-146
cell projection Hs cellular component 366 1.15e-119
neuron projection Hs cellular component 366 1.15e-119
ribosome binding Hs molecular function 366 1.15e-119
costamere Hs cellular component 435 1.58e-146
dendritic spine Hs cellular component 435 1.58e-146
perikaryon Hs cellular component 366 1.15e-119
axon terminus Hs cellular component 366 1.15e-119
ion channel binding Hs molecular function 366 1.15e-119
synapse Hs cellular component 366 1.15e-119
postsynaptic membrane Hs cellular component 366 1.15e-119
protein heterodimerization activity Hs molecular function 435 1.58e-146
mRNA 5'-UTR binding Hs molecular function 366 1.15e-119
perinuclear region of cytoplasm Hs cellular component 435 1.58e-146
extracellular exosome Hs cellular component 414 7.89e-138
dynein complex binding Hs molecular function 366 1.15e-119
neuronal ribonucleoprotein granule Hs cellular component 366 1.15e-119
glial cell projection Hs cellular component 366 1.15e-119
presynapse Hs cellular component 366 1.15e-119
postsynapse Hs cellular component 366 1.15e-119
dendritic filopodium Hs cellular component 366 1.15e-119
messenger ribonucleoprotein complex Hs cellular component 366 1.15e-119
growth cone filopodium Hs cellular component 366 1.15e-119
sequence-specific mRNA binding Hs molecular function 366 1.15e-119
ribonucleoprotein complex Hs cellular component 366 1.15e-119

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 4.4E-5
RNA binding Gene3D molecular function 1.3E-24