Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

RPS3A

Species

B.leachii

Unique Gene ID

Boleac.g00001996

Gene Model ID

Boleac.CG.SB_v3.S127.g01996

Location

S127:128580..132231

Transcript Models and Sequences

  Boleac.CG.SB_v3.S127.g01996.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Ribosomal_S1/3_euk Hamap 40S ribosomal protein S1/3, eukaryotes
Ribosomal_S3Ae Pfam Ribosomal protein S3Ae
Ribosomal_S3Ae SMART Ribosomal protein S3Ae

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
cytoplasmic translation Hs biological process
RNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
cytosolic small ribosomal subunit Hs cellular component
cell differentiation Hs biological process
intracellular ribonucleoprotein complex Hs cellular component
negative regulation of apoptotic process Hs biological process
mRNA 5'-UTR binding Hs molecular function
extracellular exosome Hs cellular component

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 411 6.05e-147
structural constituent of ribosome Hs molecular function 411 6.05e-147
protein binding Hs molecular function 411 6.05e-147
intracellular Hs cellular component 411 6.05e-147
nucleus Hs cellular component 411 6.05e-147
nucleoplasm Hs cellular component 411 6.05e-147
nucleolus Hs cellular component 411 6.05e-147
cytoplasm Hs cellular component 411 6.05e-147
endoplasmic reticulum Hs cellular component 411 6.05e-147
cytosol Hs cellular component 411 6.05e-147
ribosome Hs cellular component 411 6.05e-147
focal adhesion Hs cellular component 411 6.05e-147
cytosolic small ribosomal subunit Hs cellular component 411 6.05e-147
intracellular ribonucleoprotein complex Hs cellular component 411 6.05e-147
mRNA 5'-UTR binding Hs molecular function 411 6.05e-147
extracellular exosome Hs cellular component 411 6.05e-147

GO (InterProScan)

4 results

GO Term Analysis Type e-value
structural constituent of ribosome SMART molecular function 2.3E-139
intracellular Hamap cellular component 40.813
ribosome SMART cellular component 2.3E-139
translation SMART biological process 2.3E-139