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GENE CARD

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Gene Card

Best human hits

DDX10; DDX18; DDX55

Species

B.leachii

Unique Gene ID

Boleac.g00002101

Gene Model ID

Boleac.CG.SB_v3.S129.g02101

Location

S129:170443..177074

Transcript Models and Sequences

  Boleac.CG.SB_v3.S129.g02101.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
Helicase_C ProSiteProfiles Helicase, C-terminal
Helicase_C SMART Helicase, C-terminal
Helicase_C Pfam Helicase, C-terminal
Helicase_C CDD Helicase, C-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
DUF4217 SMART Domain of unknown function DUF4217
DUF4217 Pfam Domain of unknown function DUF4217
RNA-helicase_DEAD-box_CS ProSitePatterns ATP-dependent RNA helicase DEAD-box, conserved site
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
RNA helicase activity Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
ATP binding Hs molecular function
nucleolus Hs cellular component
cytoplasm Hs cellular component
RNA secondary structure unwinding Hs biological process
hydrolase activity Hs molecular function
anterior head development Hs biological process

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 660 0.0
nucleic acid binding Hs molecular function 660 0.0
RNA binding Hs molecular function 660 0.0
RNA helicase activity Hs molecular function 660 0.0
ATP-dependent RNA helicase activity Hs molecular function 660 0.0
helicase activity Hs molecular function 660 0.0
protein binding Hs molecular function 369 1.37e-117
ATP binding Hs molecular function 660 0.0
nucleus Hs cellular component 369 1.37e-117
chromosome Hs cellular component 369 1.37e-117
nucleolus Hs cellular component 660 0.0
cytoplasm Hs cellular component 660 0.0
cytosol Hs cellular component 293 2.29e-89
membrane Hs cellular component 369 1.37e-117
hydrolase activity Hs molecular function 660 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 2.3E-47
ATP binding Pfam molecular function 2.3E-47