Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

ABCF1; ABCF2; ABCF3

Species

B.leachii

Unique Gene ID

Boleac.g00002422

Gene Model ID

Boleac.CG.SB_v3.S136.g02422

Location

S136:90191..97345

Transcript Models and Sequences

  Boleac.CG.SB_v3.S136.g02422.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
AAA+_ATPase SMART AAA+ ATPase domain
ABC_transporter-like ProSiteProfiles ABC transporter-like
ABC_transporter_CS ProSitePatterns ABC transporter, conserved site
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
ABC_tran_Xtn Pfam ABC-transporter extension domain
ABC_transporter-like Pfam ABC transporter-like

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
transporter activity Hs molecular function
ATP binding Hs molecular function
mitochondrial envelope Hs cellular component
membrane Hs cellular component
ATPase activity Hs molecular function
ATP-binding cassette (ABC) transporter complex Hs cellular component

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 863 0.0
RNA binding Hs molecular function 360 1.68e-113
transporter activity Hs molecular function 863 0.0
protein binding Hs molecular function 434 2.18e-143
ATP binding Hs molecular function 863 0.0
nucleus Hs cellular component 360 1.68e-113
nuclear envelope Hs cellular component 360 1.68e-113
nucleoplasm Hs cellular component 360 1.68e-113
cytoplasm Hs cellular component 360 1.68e-113
mitochondrial envelope Hs cellular component 863 0.0
cytosol Hs cellular component 360 1.68e-113
ribosome Hs cellular component 360 1.68e-113
translation factor activity, RNA binding Hs molecular function 360 1.68e-113
membrane Hs cellular component 863 0.0
ATPase activity Hs molecular function 863 0.0
ATP-binding cassette (ABC) transporter complex Hs cellular component 863 0.0
cadherin binding Hs molecular function 434 2.18e-143

GO (InterProScan)

2 results

GO Term Analysis Type e-value
ATP binding Pfam molecular function 1.2E-21
ATPase activity Pfam molecular function 1.2E-21