Login
Help

GENE CARD

Submit your Data

  1. Gene 'KH2012:KH.C5.371'

Gene Card

Best human hits

SNAI1; SNAI2; SNAI3

Species

B.leachii

Unique Gene ID

Boleac.g00006267

Gene Model ID

Boleac.CG.SB_v3.S264.g06267

Location

S264:75667..78338

Transcript Models and Sequences

  Boleac.CG.SB_v3.S264.g06267.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 207 1.21e-63
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 195 8.60e-59
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 195 8.60e-59
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 207 1.21e-63
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 195 8.60e-59
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 207 1.21e-63
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 195 8.60e-59
nucleic acid binding Hs molecular function 207 1.21e-63
DNA binding Hs molecular function 207 1.21e-63
chromatin binding Hs molecular function 207 1.21e-63
transcription factor activity, sequence-specific DNA binding Hs molecular function 195 8.60e-59
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 207 1.21e-63
copper ion binding Hs molecular function 195 8.60e-59
protein binding Hs molecular function 207 1.21e-63
nucleus Hs cellular component 207 1.21e-63
nucleoplasm Hs cellular component 207 1.21e-63
transcription factor complex Hs cellular component 195 8.60e-59
pericentric heterochromatin Hs cellular component 182 5.00e-54
cytoplasm Hs cellular component 207 1.21e-63
cytosol Hs cellular component 182 5.00e-54
kinase binding Hs molecular function 182 5.00e-54
sequence-specific DNA binding Hs molecular function 207 1.21e-63
metal ion binding Hs molecular function 207 1.21e-63

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 6.1E-5