Gene Card
Best human hits
LSM10; LSM2
Species
Unique Gene ID
Boleac.g00008833
Gene Model ID
Boleac.CG.SB_v3.S389.g08833
Location
S389:84228..85762
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
3 results
| IPR Term | Analysis | Definition |
|---|---|---|
| LSM_dom_euk/arc | Pfam | LSM domain, eukaryotic/archaea-type |
| LSM_dom_euk/arc | SMART | LSM domain, eukaryotic/archaea-type |
| LSM_dom_sf | SUPERFAMILY | LSM domain superfamily |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
14 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| U7 snRNP | Hs | cellular component |
| termination of RNA polymerase II transcription | Hs | biological process |
| mRNA processing | Hs | biological process |
| RNA splicing | Hs | biological process |
| Cajal body | Hs | cellular component |
| nuclear body | Hs | cellular component |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| histone pre-mRNA DCP binding | Hs | molecular function |
| U7 snRNA binding | Hs | molecular function |
| positive regulation of G1/S transition of mitotic cell cycle | Hs | biological process |
GO (Blast)
20 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| P-body | Hs | cellular component | 48.1 | 1.21e-08 |
| RNA binding | Hs | molecular function | 61.2 | 2.00e-13 |
| protein binding | Hs | molecular function | 61.2 | 2.00e-13 |
| nucleus | Hs | cellular component | 61.2 | 2.00e-13 |
| nucleoplasm | Hs | cellular component | 61.2 | 2.00e-13 |
| spliceosomal complex | Hs | cellular component | 48.1 | 1.21e-08 |
| U7 snRNP | Hs | cellular component | 61.2 | 2.00e-13 |
| U6 snRNP | Hs | cellular component | 48.1 | 1.21e-08 |
| cytosol | Hs | cellular component | 48.1 | 1.21e-08 |
| Cajal body | Hs | cellular component | 61.2 | 2.00e-13 |
| nuclear body | Hs | cellular component | 61.2 | 2.00e-13 |
| U6 snRNA binding | Hs | molecular function | 48.1 | 1.21e-08 |
| Ral GTPase binding | Hs | molecular function | 48.1 | 1.21e-08 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 61.2 | 2.00e-13 |
| U4/U6 x U5 tri-snRNP complex | Hs | cellular component | 48.1 | 1.21e-08 |
| precatalytic spliceosome | Hs | cellular component | 48.1 | 1.21e-08 |
| catalytic step 2 spliceosome | Hs | cellular component | 48.1 | 1.21e-08 |
| histone pre-mRNA DCP binding | Hs | molecular function | 61.2 | 2.00e-13 |
| U7 snRNA binding | Hs | molecular function | 61.2 | 2.00e-13 |
| Lsm1-7-Pat1 complex | Hs | cellular component | 48.1 | 1.21e-08 |
| GO Term | Analysis | Type | e-value |
|---|
