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GENE CARD

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Gene Card

Best human hits

RPL5

Species

B.schlosseri

Unique Gene ID

Boschl.g00005470

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g05470

Location

chrUn:36480725..36487937

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g05470.01.t

External Database Gene Card

External database links

No result

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WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Rbsml_L5_euk/L18_arc Hamap Ribosomal protein L5 eukaryotic/L18 archaeal
Rbsml_L5_euk/L18_arc PRINTS Ribosomal protein L5 eukaryotic/L18 archaeal
Rbsml_L5e/L18P_C Pfam Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal
Rbsml_L5_euk/L18_arc PANTHER Ribosomal protein L5 eukaryotic/L18 archaeal
Rbsml_L5_euk/L18_arc Pfam Ribosomal protein L5 eukaryotic/L18 archaeal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ribosomal large subunit assembly Hs biological process
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
RNA binding Hs molecular function
mRNA 3'-UTR binding Hs molecular function
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
5S rRNA binding Hs molecular function
positive regulation of gene expression Hs biological process
membrane Hs cellular component
rRNA binding Hs molecular function
cytosolic large ribosomal subunit Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
ubiquitin protein ligase binding Hs molecular function
macromolecular complex Hs cellular component
ribosomal large subunit biogenesis Hs biological process
positive regulation of translation Hs biological process
mRNA 5'-UTR binding Hs molecular function
protein stabilization Hs biological process
extracellular exosome Hs cellular component
negative regulation of ubiquitin protein ligase activity Hs biological process
ubiquitin ligase inhibitor activity Hs molecular function
negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process Hs biological process

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA binding Hs molecular function 442 2.79e-158
mRNA 3'-UTR binding Hs molecular function 442 2.79e-158
structural constituent of ribosome Hs molecular function 442 2.79e-158
protein binding Hs molecular function 442 2.79e-158
intracellular Hs cellular component 442 2.79e-158
nucleus Hs cellular component 442 2.79e-158
nucleoplasm Hs cellular component 442 2.79e-158
nucleolus Hs cellular component 442 2.79e-158
cytoplasm Hs cellular component 442 2.79e-158
endoplasmic reticulum Hs cellular component 442 2.79e-158
cytosol Hs cellular component 442 2.79e-158
ribosome Hs cellular component 442 2.79e-158
focal adhesion Hs cellular component 442 2.79e-158
5S rRNA binding Hs molecular function 442 2.79e-158
membrane Hs cellular component 442 2.79e-158
rRNA binding Hs molecular function 442 2.79e-158
cytosolic large ribosomal subunit Hs cellular component 442 2.79e-158
intracellular ribonucleoprotein complex Hs cellular component 442 2.79e-158
ubiquitin protein ligase binding Hs molecular function 442 2.79e-158
macromolecular complex Hs cellular component 442 2.79e-158
mRNA 5'-UTR binding Hs molecular function 442 2.79e-158
extracellular exosome Hs cellular component 442 2.79e-158
ubiquitin ligase inhibitor activity Hs molecular function 442 2.79e-158

GO (InterProScan)

5 results

GO Term Analysis Type e-value
structural constituent of ribosome PANTHER molecular function 1.9E-152
intracellular PANTHER cellular component 1.9E-152
ribosome PANTHER cellular component 1.9E-152
translation PANTHER biological process 1.9E-152
5S rRNA binding PANTHER molecular function 1.9E-152

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