Aniseed - Gene card

Gene Card

Best human hits

FNTA; PTAR1; RABGGTA

Species

B.schlosseri

Unique Gene ID

Boschl.g00023688

Gene Model ID

Boschl.CG.Botznik2013.chr2.g23688

Location

chr2:7561116..7562784

Transcript Models and Sequences

Boschl.CG.Botznik2013.chr2.g23688.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Prenyl_trans_a	ProSiteProfiles	Protein prenyltransferase, alpha subunit
RabGGTase_alpha	PANTHER	Geranylgeranyl transferase type-2 subunit alpha
LRR_dom_sf	Gene3D	Leucine-rich repeat domain superfamily
Prenyl_trans_a	Pfam	Protein prenyltransferase, alpha subunit

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
prenyltransferase activity	Hs	molecular function
Rab geranylgeranyltransferase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleoplasm	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
Rab-protein geranylgeranyltransferase complex	Hs	cellular component
cellular protein modification process	Hs	biological process
visual perception	Hs	biological process
zinc ion binding	Hs	molecular function
protein prenyltransferase activity	Hs	molecular function
transferase activity	Hs	molecular function
Rab GTPase binding	Hs	molecular function
protein prenylation	Hs	biological process
protein geranylgeranylation	Hs	biological process
regulation of apoptotic process	Hs	biological process
post-translational protein modification	Hs	biological process
protein heterodimerization activity	Hs	molecular function

GO (Blast)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
prenyltransferase activity	Hs	molecular function	393	6.91e-131
protein farnesyltransferase activity	Hs	molecular function	64.3	5.90e-11
protein geranylgeranyltransferase activity	Hs	molecular function	64.3	5.90e-11
CAAX-protein geranylgeranyltransferase activity	Hs	molecular function	64.3	5.90e-11
Rab geranylgeranyltransferase activity	Hs	molecular function	393	6.91e-131
protein binding	Hs	molecular function	393	6.91e-131
nucleoplasm	Hs	cellular component	393	6.91e-131
cytoplasm	Hs	cellular component	64.3	5.90e-11
cytosol	Hs	cellular component	393	6.91e-131
microtubule associated complex	Hs	cellular component	64.3	5.90e-11
plasma membrane	Hs	cellular component	393	6.91e-131
CAAX-protein geranylgeranyltransferase complex	Hs	cellular component	64.3	5.90e-11
protein farnesyltransferase complex	Hs	cellular component	64.3	5.90e-11
Rab-protein geranylgeranyltransferase complex	Hs	cellular component	393	6.91e-131
microtubule binding	Hs	molecular function	64.3	5.90e-11
zinc ion binding	Hs	molecular function	393	6.91e-131
protein prenyltransferase activity	Hs	molecular function	393	6.91e-131
transferase activity	Hs	molecular function	393	6.91e-131
Rab GTPase binding	Hs	molecular function	393	6.91e-131
acetylcholine receptor regulator activity	Hs	molecular function	64.3	5.90e-11
receptor tyrosine kinase binding	Hs	molecular function	64.3	5.90e-11
alpha-tubulin binding	Hs	molecular function	64.3	5.90e-11
protein heterodimerization activity	Hs	molecular function	393	6.91e-131
transferase complex	Hs	cellular component	47.0	1.82e-05

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
Rab-protein geranylgeranyltransferase complex	PANTHER	cellular component	7.3E-101
protein prenyltransferase activity	Pfam	molecular function	1.1E-8
protein prenylation	Pfam	biological process	1.1E-8
protein geranylgeranylation	PANTHER	biological process	7.3E-101