Gene Card
Best human hits
ALYREF; POLDIP3; RBM8A
Species
Unique Gene ID
Boschl.g00033709
Gene Model ID
Boschl.CG.Botznik2013.chrUn.g33709
Location
chrUn:220193838..220201846
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| PDIP3 | PANTHER | Polymerase delta-interacting protein 3 |
| PDIP3_RRM | CDD | PDIP3, RNA recognition motif |
| RRM_dom | SMART | RNA recognition motif domain |
| RRM_dom | Pfam | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| transcription export complex | Hs | cellular component | 103 | 6.22e-26 |
| nucleic acid binding | Hs | molecular function | 103 | 6.22e-26 |
| RNA binding | Hs | molecular function | 103 | 6.22e-26 |
| mRNA binding | Hs | molecular function | 35.8 | 0.008 |
| protein binding | Hs | molecular function | 103 | 6.22e-26 |
| intracellular | Hs | cellular component | 103 | 6.22e-26 |
| nucleus | Hs | cellular component | 103 | 6.22e-26 |
| nucleoplasm | Hs | cellular component | 103 | 6.22e-26 |
| spliceosomal complex | Hs | cellular component | 35.8 | 0.008 |
| cytoplasm | Hs | cellular component | 103 | 6.22e-26 |
| cytosol | Hs | cellular component | 103 | 6.22e-26 |
| nuclear speck | Hs | cellular component | 103 | 6.22e-26 |
| dendrite | Hs | cellular component | 35.8 | 0.008 |
| exon-exon junction complex | Hs | cellular component | 103 | 6.22e-26 |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component | 103 | 6.22e-26 |
| neuronal cell body | Hs | cellular component | 35.8 | 0.008 |
| catalytic step 2 spliceosome | Hs | cellular component | 35.8 | 0.008 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 4.43E-14 |
| RNA binding | PANTHER | molecular function | 6.9E-38 |
| mRNA export from nucleus | PANTHER | biological process | 6.9E-38 |
