Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

NAF1

Species

B.schlosseri

Unique Gene ID

Boschl.g00047093

Gene Model ID

Boschl.CG.Botznik2013.chr10.g47093

Location

chr10:9929554..9933938

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr10.g47093.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
H/ACA_rnp_Gar1/Naf1 Pfam H/ACA ribonucleoprotein complex, subunit Gar1/Naf1
Transl_B-barrel_sf SUPERFAMILY Translation protein, beta-barrel domain superfamily
Gar1/Naf1_Cbf5-bd_sf Gene3D H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 147 2.61e-40
protein binding Hs molecular function 147 2.61e-40
nucleus Hs cellular component 147 2.61e-40
small nucleolar ribonucleoprotein complex Hs cellular component 147 2.61e-40
cytoplasm Hs cellular component 147 2.61e-40
intracellular ribonucleoprotein complex Hs cellular component 147 2.61e-40
telomerase RNA binding Hs molecular function 147 2.61e-40

GO (InterProScan)

2 results

GO Term Analysis Type e-value
pseudouridine synthesis Pfam biological process 3.5E-33
ribosome biogenesis Pfam biological process 3.5E-33