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  2. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

EEF1A1; EEF1A2; HBS1L

Species

B.schlosseri

Unique Gene ID

Boschl.g00051445

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g51445

Location

chrUn:316393692..316395380

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g51445.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Transl_elong_EFTu/EF1A_C Pfam Translation elongation factor EFTu/EF1A, C-terminal
Transl_elong_EF1A/Init_IF2_C SUPERFAMILY Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
Transl_elong_EF1A_euk/arc Hamap Translation elongation factor EF1A, eukaryotic/archaeal
EFTu-like_2 Pfam Translation elongation factor EFTu-like, domain 2
TF_GTP-bd_dom Pfam Transcription factor, GTP-binding domain
Transl_B-barrel_sf SUPERFAMILY Translation protein, beta-barrel domain superfamily
Transl_elong_EF1A_euk/arc TIGRFAM Translation elongation factor EF1A, eukaryotic/archaeal
TF_GTP-bd_dom PRINTS Transcription factor, GTP-binding domain
G_TR_CS ProSitePatterns Tr-type G domain, conserved site
TF_GTP-bd_dom ProSiteProfiles Transcription factor, GTP-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
tRNA binding Hs molecular function
nucleotide binding Hs molecular function
RNA binding Hs molecular function
translation elongation factor activity Hs molecular function
GTPase activity Hs molecular function
protein binding Hs molecular function
calmodulin binding Hs molecular function
GTP binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
eukaryotic translation elongation factor 1 complex Hs cellular component
plasma membrane Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
translation Hs biological process
translational elongation Hs biological process
protein methylation Hs biological process
translation factor activity, RNA binding Hs molecular function
response to inorganic substance Hs biological process
membrane Hs cellular component
protein kinase binding Hs molecular function
cortical actin cytoskeleton Hs cellular component
ruffle membrane Hs cellular component
secretory granule lumen Hs cellular component
neuronal cell body Hs cellular component
positive regulation of apoptotic process Hs biological process
myelin sheath Hs cellular component
response to electrical stimulus Hs biological process
extracellular exosome Hs cellular component
cellular response to epidermal growth factor stimulus Hs biological process
cytoplasmic side of lysosomal membrane Hs cellular component
ficolin-1-rich granule lumen Hs cellular component

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
tRNA binding Hs molecular function 763 0.0
nucleotide binding Hs molecular function 763 0.0
RNA binding Hs molecular function 763 0.0
translation elongation factor activity Hs molecular function 763 0.0
GTPase activity Hs molecular function 763 0.0
protein binding Hs molecular function 763 0.0
calmodulin binding Hs molecular function 763 0.0
GTP binding Hs molecular function 763 0.0
extracellular region Hs cellular component 763 0.0
extracellular space Hs cellular component 763 0.0
intracellular Hs cellular component 321 6.77e-103
nucleus Hs cellular component 763 0.0
nucleolus Hs cellular component 763 0.0
cytoplasm Hs cellular component 763 0.0
cytosol Hs cellular component 763 0.0
eukaryotic translation elongation factor 1 complex Hs cellular component 763 0.0
plasma membrane Hs cellular component 763 0.0
translation factor activity, RNA binding Hs molecular function 762 0.0
membrane Hs cellular component 763 0.0
integral component of membrane Hs cellular component 321 6.77e-103
protein kinase binding Hs molecular function 763 0.0
cortical actin cytoskeleton Hs cellular component 763 0.0
ruffle membrane Hs cellular component 763 0.0
secretory granule lumen Hs cellular component 763 0.0
neuronal cell body Hs cellular component 762 0.0
myelin sheath Hs cellular component 763 0.0
extracellular exosome Hs cellular component 763 0.0
cytoplasmic side of lysosomal membrane Hs cellular component 763 0.0
ficolin-1-rich granule lumen Hs cellular component 763 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
translation elongation factor activity TIGRFAM molecular function 1.5E-218
GTPase activity Pfam molecular function 4.2E-54
GTP binding TIGRFAM molecular function 1.5E-218
cytoplasm TIGRFAM cellular component 1.5E-218
translational elongation TIGRFAM biological process 1.5E-218

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