Gene Card
Best human hits
EXD1; EXD3; EXOSC10
Species
Unique Gene ID
Boschl.g00058025
Gene Model ID
Boschl.CG.Botznik2013.chr5.g58025
Location
chr5:9248646..9250947
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
8 results
| IPR Term | Analysis | Definition |
|---|---|---|
| HRDC_dom | SMART | HRDC domain |
| HRDC_dom | Pfam | HRDC domain |
| HRDC_dom | ProSiteProfiles | HRDC domain |
| Exosome-assoc_fac_Rrp6_N | Pfam | Exosome-associated factor Rrp6, N-terminal |
| HRDC-like_sf | SUPERFAMILY | HRDC-like superfamily |
| RNaseH-like_sf | SUPERFAMILY | Ribonuclease H-like superfamily |
| 3'-5'_exonuclease_dom | Pfam | 3'-5' exonuclease domain |
| 3'-5'_exonuclease_dom | SMART | 3'-5' exonuclease domain |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
26 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 556 | 0.0 |
| 3'-5'-exoribonuclease activity | Hs | molecular function | 556 | 0.0 |
| nuclear exosome (RNase complex) | Hs | cellular component | 556 | 0.0 |
| exosome (RNase complex) | Hs | cellular component | 556 | 0.0 |
| nucleic acid binding | Hs | molecular function | 556 | 0.0 |
| RNA binding | Hs | molecular function | 556 | 0.0 |
| catalytic activity | Hs | molecular function | 556 | 0.0 |
| nuclease activity | Hs | molecular function | 556 | 0.0 |
| exonuclease activity | Hs | molecular function | 556 | 0.0 |
| exoribonuclease activity | Hs | molecular function | 556 | 0.0 |
| protein binding | Hs | molecular function | 556 | 0.0 |
| intracellular | Hs | cellular component | 556 | 0.0 |
| nucleus | Hs | cellular component | 556 | 0.0 |
| nucleoplasm | Hs | cellular component | 556 | 0.0 |
| nucleolus | Hs | cellular component | 556 | 0.0 |
| cytoplasm | Hs | cellular component | 556 | 0.0 |
| cytosol | Hs | cellular component | 556 | 0.0 |
| 3'-5' exonuclease activity | Hs | molecular function | 556 | 0.0 |
| membrane | Hs | cellular component | 556 | 0.0 |
| hydrolase activity | Hs | molecular function | 556 | 0.0 |
| transcriptionally active chromatin | Hs | cellular component | 556 | 0.0 |
| protein homodimerization activity | Hs | molecular function | 41.2 | 0.002 |
| P granule | Hs | cellular component | 41.2 | 0.002 |
| metal ion binding | Hs | molecular function | 45.1 | 1.61e-04 |
| telomerase RNA binding | Hs | molecular function | 556 | 0.0 |
| PET complex | Hs | cellular component | 41.2 | 0.002 |
GO (InterProScan)
9 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleotide binding | SUPERFAMILY | molecular function | 7.63E-25 |
| nuclear exosome (RNase complex) | Pfam | cellular component | 3.3E-14 |
| nucleic acid binding | SMART | molecular function | 2.3E-49 |
| catalytic activity | SUPERFAMILY | molecular function | 7.63E-25 |
| intracellular | SMART | cellular component | 2.4E-15 |
| nucleobase-containing compound metabolic process | SMART | biological process | 2.3E-49 |
| RNA processing | Pfam | biological process | 3.3E-14 |
| 3'-5' exonuclease activity | SMART | molecular function | 2.3E-49 |
| cellular metabolic process | SUPERFAMILY | biological process | 7.63E-25 |
