Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000001888
NCBI Reference Sequence	XM_018815027.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg034b24

Plate: R1CiGC21e19

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
WD40_repeat	ProSiteProfiles	WD40 repeat
WD40_repeat_CS	ProSitePatterns	WD40 repeat, conserved site
WD40_repeat	SMART	WD40 repeat
WD40_repeat_dom_sf	SUPERFAMILY	WD40-repeat-containing domain superfamily
WD40_repeat	Pfam	WD40 repeat
G-protein_beta_WD-40_rep	PRINTS	G-protein beta WD-40 repeat
Histone-bd_RBBP4_N	Pfam	Histone-binding protein RBBP4, N-terminal
WD40_repeat_dom	ProSiteProfiles	WD40-repeat-containing domain
WD40/YVTN_repeat-like_dom_sf	Gene3D	WD40/YVTN repeat-like-containing domain superfamily

GOSlim

22 results

GO Term	Annotation Origin	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
chromatin binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Orthology	cellular component
cytosol	Orthology	cellular component
DNA replication	Orthology	biological process
macromolecular complex	Orthology	cellular component
sequence-specific double-stranded DNA binding	Orthology	molecular function
intracellular non-membrane-bounded organelle	Orthology	cellular component
organelle organization	Orthology	biological process
DNA binding	Orthology	molecular function
nuclear lumen	Blast	cellular component
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
hydrolase activity	Blast	molecular function
cellular protein modification process	Blast	biological process
nucleoside-triphosphatase activity	Blast	molecular function
nucleoplasm part	Blast	cellular component
macromolecular complex binding	Blast	molecular function
enzyme binding	Blast	molecular function

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
chromatin binding	Hs	molecular function
DNA replication origin binding	Hs	molecular function
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
chromosome	Hs	cellular component
nucleolus	Hs	cellular component
cytosol	Hs	cellular component
DNA replication	Hs	biological process
nucleosome assembly	Hs	biological process
nucleosome disassembly	Hs	biological process
macromolecular complex	Hs	cellular component
histone binding	Hs	molecular function

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	138	1.97e-36
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	138	1.97e-36
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	138	1.97e-36
chromatin binding	Hs	molecular function	506	7.19e-179
DNA replication origin binding	Hs	molecular function	506	7.19e-179
RNA binding	Hs	molecular function	506	7.19e-179
histone deacetylase activity	Hs	molecular function	138	1.97e-36
protein binding	Hs	molecular function	506	7.19e-179
nucleus	Hs	cellular component	506	7.19e-179
nucleoplasm	Hs	cellular component	138	1.97e-36
chromosome	Hs	cellular component	506	7.19e-179
nucleolus	Hs	cellular component	506	7.19e-179
cytosol	Hs	cellular component	506	7.19e-179
DNA-dependent ATPase activity	Hs	molecular function	138	1.97e-36
Sin3 complex	Hs	cellular component	138	1.97e-36
NuRD complex	Hs	cellular component	138	1.97e-36
NURF complex	Hs	cellular component	138	1.97e-36
nucleosomal DNA binding	Hs	molecular function	138	1.97e-36
macromolecular complex	Hs	cellular component	506	7.19e-179
CAF-1 complex	Hs	cellular component	138	1.97e-36
ESC/E(Z) complex	Hs	cellular component	138	1.97e-36
histone binding	Hs	molecular function	506	7.19e-179
histone deacetylase binding	Hs	molecular function	138	1.97e-36

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	1.6E-104

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences