Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000001176

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg030f04

Plate: R1CiGC20b05

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term	Analysis	Definition
SPRY_dom	SMART	SPRY domain
Helicase_ATP-bd	ProSiteProfiles	Helicase superfamily 1/2, ATP-binding domain
Helicase_C	CDD	Helicase, C-terminal
SPRY_dom	Pfam	SPRY domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
B30.2/SPRY	ProSiteProfiles	B30.2/SPRY domain
Helicase_C	ProSiteProfiles	Helicase, C-terminal
ConA-like_dom_sf	SUPERFAMILY	Concanavalin A-like lectin/glucanase domain superfamily
DEAD/DEAH_box_helicase_dom	Pfam	DEAD/DEAH box helicase domain
RNA_helicase_DEAD_Q_motif	ProSiteProfiles	RNA helicase, DEAD-box type, Q motif
Helicase_ATP-bd	SMART	Helicase superfamily 1/2, ATP-binding domain
Helicase_C	Pfam	Helicase, C-terminal
Helicase_C	SMART	Helicase, C-terminal

GOSlim

44 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
mRNA splicing, via spliceosome	Orthology	biological process
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
transcription cofactor activity	Orthology	molecular function
transcription coactivator activity	Blast	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
calmodulin binding	Blast	molecular function
ATP binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
RNA processing	Orthology	biological process
mRNA processing	Orthology	biological process
multicellular organism development	Orthology	biological process
RNA splicing	Orthology	biological process
membrane	Orthology	cellular component
nuclear speck	Blast	cellular component
hydrolase activity	Orthology	molecular function
enzyme binding	Blast	molecular function
extracellular exosome	Blast	cellular component
nucleoside-triphosphatase activity	Orthology	molecular function
DNA repair	Orthology	biological process
regulation of gene expression	Orthology	biological process
translational initiation	Orthology	biological process
cytoplasmic part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
macromolecular complex	Orthology	cellular component
RNA metabolic process	Orthology	biological process
organelle organization	Orthology	biological process
response to organic substance	Orthology	biological process
nuclear body	Orthology	cellular component
intracellular part	Orthology	cellular component
nuclear part	Blast	cellular component
macromolecular complex binding	Blast	molecular function
receptor binding	Blast	molecular function
transcription factor binding	Blast	molecular function
intracellular	Blast	cellular component

GO (Orthology)

42 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
spliceosomal complex assembly	Hs	biological process
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription cofactor activity	Hs	molecular function
RNA binding	Hs	molecular function
RNA helicase activity	Hs	molecular function
double-stranded RNA binding	Hs	molecular function
ATP-dependent RNA helicase activity	Hs	molecular function
helicase activity	Hs	molecular function
nuclease activity	Hs	molecular function
exonuclease activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
double-strand break repair	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
tRNA splicing, via endonucleolytic cleavage and ligation	Hs	biological process
mRNA processing	Hs	biological process
regulation of translational initiation	Hs	biological process
multicellular organism development	Hs	biological process
ATP-dependent helicase activity	Hs	molecular function
tRNA processing	Hs	biological process
poly(A) binding	Hs	molecular function
response to virus	Hs	biological process
cytoplasmic stress granule	Hs	cellular component
RNA secondary structure unwinding	Hs	biological process
membrane	Hs	cellular component
hydrolase activity	Hs	molecular function
intracellular ribonucleoprotein complex	Hs	cellular component
DNA duplex unwinding	Hs	biological process
DNA/RNA helicase activity	Hs	molecular function
response to exogenous dsRNA	Hs	biological process
cleavage body	Hs	cellular component
tRNA-splicing ligase complex	Hs	cellular component
nucleic acid phosphodiester bond hydrolysis	Hs	biological process

GO (Blast)

47 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	944	0.0
nucleic acid binding	Hs	molecular function	944	0.0
DNA binding	Hs	molecular function	944	0.0
chromatin binding	Hs	molecular function	944	0.0
transcription cofactor activity	Hs	molecular function	944	0.0
transcription coactivator activity	Hs	molecular function	136	3.50e-33
RNA binding	Hs	molecular function	944	0.0
RNA helicase activity	Hs	molecular function	944	0.0
double-stranded RNA binding	Hs	molecular function	944	0.0
mRNA 3'-UTR binding	Hs	molecular function	135	3.44e-33
ATP-dependent RNA helicase activity	Hs	molecular function	944	0.0
helicase activity	Hs	molecular function	944	0.0
nuclease activity	Hs	molecular function	944	0.0
exonuclease activity	Hs	molecular function	944	0.0
protein binding	Hs	molecular function	944	0.0
calmodulin binding	Hs	molecular function	135	3.44e-33
ATP binding	Hs	molecular function	944	0.0
nucleus	Hs	cellular component	944	0.0
nucleoplasm	Hs	cellular component	944	0.0
spliceosomal complex	Hs	cellular component	135	3.44e-33
nucleolus	Hs	cellular component	944	0.0
cytoplasm	Hs	cellular component	944	0.0
cytosol	Hs	cellular component	944	0.0
ATP-dependent helicase activity	Hs	molecular function	944	0.0
poly(A) binding	Hs	molecular function	944	0.0
RNA-dependent ATPase activity	Hs	molecular function	136	3.50e-33
cytoplasmic stress granule	Hs	cellular component	944	0.0
membrane	Hs	cellular component	944	0.0
nuclear speck	Hs	cellular component	136	3.50e-33
hydrolase activity	Hs	molecular function	944	0.0
enzyme binding	Hs	molecular function	135	3.44e-33
intracellular ribonucleoprotein complex	Hs	cellular component	944	0.0
DNA/RNA helicase activity	Hs	molecular function	944	0.0
MH2 domain binding	Hs	molecular function	135	3.44e-33
pre-mRNA binding	Hs	molecular function	135	3.44e-33
ribonucleoprotein complex binding	Hs	molecular function	135	3.44e-33
SMAD binding	Hs	molecular function	135	3.44e-33
calcium-dependent protein binding	Hs	molecular function	135	3.44e-33
androgen receptor binding	Hs	molecular function	135	3.44e-33
extracellular exosome	Hs	cellular component	135	3.44e-33
R-SMAD binding	Hs	molecular function	135	3.44e-33
primary miRNA binding	Hs	molecular function	135	3.44e-33
catalytic step 2 spliceosome	Hs	cellular component	135	3.44e-33
SMAD protein complex	Hs	cellular component	135	3.44e-33
cleavage body	Hs	cellular component	944	0.0
tRNA-splicing ligase complex	Hs	cellular component	944	0.0
promoter-specific chromatin binding	Hs	molecular function	135	3.44e-33

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
nucleic acid binding	Pfam	molecular function	4.6E-62
protein binding	SMART	molecular function	3.0E-27
ATP binding	Pfam	molecular function	4.6E-62

Gene Card

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