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Gene Card

Best human hits

LRP4; LRP6

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000044

Gene Model ID

KH2012:KH.C1.1037

Location

KhC1:2820494..2833573

Transcript Models and Sequences

  KH2012:KH.C1.1037.v1.A.SL1-1
KH2012:KH.C1.1037.v2.A.SL2-1

External Database Gene Card

External database links

4 results

Database Gene ID
ENSEMBL ENSCING00000005440
ENSEMBL ENSCING00000019336
NCBI Reference Sequence XM_009863989.2
NCBI Reference Sequence XM_018817365.1
Collections

Gene collection 1 (N. Satoh)

1 result

citb076h04

Plate: R1CiGC46i12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Sushi_SCR_CCP_dom ProSiteProfiles Sushi/SCR/CCP domain
LDLR_classB_rpt ProSiteProfiles LDLR class B repeat
6-blade_b-propeller_TolB-like Gene3D Six-bladed beta-propeller, TolB-like
Sushi_SCR_CCP_dom CDD Sushi/SCR/CCP domain
HYR_dom ProSiteProfiles HYR domain
HYR_dom Pfam HYR domain
LDLR_classB_rpt SMART LDLR class B repeat
Sushi/SCR/CCP_sf SUPERFAMILY Sushi/SCR/CCP superfamily

GOSlim

38 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
early endosome Blast cellular component
endoplasmic reticulum Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
neuronal cell body Blast cellular component
membrane raft Blast cellular component
synapse Blast cellular component
synaptic membrane Blast cellular component
membrane organization Blast biological process
organelle organization Blast biological process
macromolecular complex binding Blast molecular function
plasma membrane region Blast cellular component
organelle Blast cellular component
postsynapse Blast cellular component
neuron part Blast cellular component
macromolecular complex Blast cellular component
kinase activity Blast molecular function
enzyme regulator activity Blast molecular function
transmembrane transport Blast biological process
protein kinase binding Blast molecular function
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
bounding membrane of organelle Blast cellular component
cell surface receptor signaling pathway Blast biological process
cell-cell signaling Blast biological process
transmembrane signaling receptor activity Blast molecular function
signaling receptor activity Blast molecular function
plasma membrane part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
low-density lipoprotein receptor activity Hs molecular function 171 2.23e-43
receptor binding Hs molecular function 171 2.23e-43
frizzled binding Hs molecular function 171 2.23e-43
calcium ion binding Hs molecular function 160 7.74e-40
protein binding Hs molecular function 171 2.23e-43
extracellular region Hs cellular component 171 2.23e-43
early endosome Hs cellular component 171 2.23e-43
endoplasmic reticulum Hs cellular component 171 2.23e-43
Golgi apparatus Hs cellular component 171 2.23e-43
plasma membrane Hs cellular component 171 2.23e-43
caveola Hs cellular component 171 2.23e-43
cell surface Hs cellular component 171 2.23e-43
postsynaptic density Hs cellular component 160 7.74e-40
membrane Hs cellular component 171 2.23e-43
integral component of membrane Hs cellular component 171 2.23e-43
flotillin complex Hs cellular component 160 7.74e-40
Wnt-protein binding Hs molecular function 171 2.23e-43
kinase inhibitor activity Hs molecular function 171 2.23e-43
toxin transporter activity Hs molecular function 171 2.23e-43
dendrite Hs cellular component 160 7.74e-40
receptor tyrosine kinase binding Hs molecular function 160 7.74e-40
cytoplasmic vesicle Hs cellular component 171 2.23e-43
neuromuscular junction Hs cellular component 160 7.74e-40
early endosome membrane Hs cellular component 171 2.23e-43
apolipoprotein binding Hs molecular function 171 2.23e-43
identical protein binding Hs molecular function 171 2.23e-43
protein homodimerization activity Hs molecular function 171 2.23e-43
Wnt-activated receptor activity Hs molecular function 171 2.23e-43
neuronal cell body Hs cellular component 171 2.23e-43
receptor complex Hs cellular component 171 2.23e-43
membrane raft Hs cellular component 171 2.23e-43
synapse Hs cellular component 171 2.23e-43
coreceptor activity involved in Wnt signaling pathway Hs molecular function 171 2.23e-43
synaptic membrane Hs cellular component 160 7.74e-40
scaffold protein binding Hs molecular function 160 7.74e-40
coreceptor activity involved in canonical Wnt signaling pathway Hs molecular function 171 2.23e-43
Wnt-Frizzled-LRP5/6 complex Hs cellular component 171 2.23e-43
Wnt signalosome Hs cellular component 171 2.23e-43

GO (InterProScan)

No result

GO Term Analysis Type e-value

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