Aniseed - Gene card

Gene Card

Best human hits

HGFAC; PRSS12; TMPRSS3

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000046

Gene Model ID

KH2012:KH.C1.1039

Location

KhC1:696175..702080

Transcript Models and Sequences

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000000636
NCBI Reference Sequence	XM_002120657.4
NCBI Reference Sequence	XM_018817817.1

Collections

Gene collection 1 (N. Satoh)

1 result

citb1l23

Plate: R1CiGC28l01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

22 results

IPR Term	Analysis	Definition
LDrepeatLR_classA_rpt	ProSiteProfiles	Low-density lipoprotein (LDL) receptor class A repeat
Pan_app	Pfam	PAN/Apple domain
SRCR	PRINTS	SRCR domain
SRCR-like_dom_sf	Gene3D	SRCR-like domain superfamily
LDLR_class-A_CS	ProSitePatterns	Low-density lipoprotein (LDL) receptor class A, conserved site
LDL_receptor-like_sf	SUPERFAMILY	LDL receptor-like superfamily
SRCR	ProSiteProfiles	SRCR domain
LDrepeatLR_classA_rpt	SMART	Low-density lipoprotein (LDL) receptor class A repeat
SRCR-like_dom	SMART	SRCR-like domain
SRCR-like_dom_sf	SUPERFAMILY	SRCR-like domain superfamily
LDrepeatLR_classA_rpt	CDD	Low-density lipoprotein (LDL) receptor class A repeat
Trypsin_dom	Pfam	Serine proteases, trypsin domain
TRYPSIN_HIS	ProSitePatterns	Serine proteases, trypsin family, histidine active site
SRCR	Pfam	SRCR domain
Pan_app	ProSiteProfiles	PAN/Apple domain
Peptidase_S1_PA	SUPERFAMILY	Peptidase S1, PA clan
TRYPSIN_SER	ProSitePatterns	Serine proteases, trypsin family, serine active site
LDrepeatLR_classA_rpt	PRINTS	Low-density lipoprotein (LDL) receptor class A repeat
Trypsin_dom	SMART	Serine proteases, trypsin domain
LDrepeatLR_classA_rpt	Pfam	Low-density lipoprotein (LDL) receptor class A repeat
Trypsin_dom	ProSiteProfiles	Serine proteases, trypsin domain
Trypsin_dom	CDD	Serine proteases, trypsin domain

GOSlim

26 results

GO Term	Annotation Origin	Type
serine-type endopeptidase activity	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
cytoplasm	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
proteolysis	InterProScan	biological process
peptidase activity	Blast	molecular function
serine-type peptidase activity	Blast	molecular function
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
hydrolase activity	Blast	molecular function
axon	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
neuronal cell body	Blast	cellular component
synapse	Blast	cellular component
membrane organization	Blast	biological process
organelle organization	Blast	biological process
molecular function regulator	Blast	molecular function
transmembrane transport	Blast	biological process
sodium ion transport	Blast	biological process
synapse part	Blast	cellular component
cell projection part	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
serine-type endopeptidase activity	Hs	molecular function	224	8.89e-62
scavenger receptor activity	Hs	molecular function	224	8.89e-62
protein binding	Hs	molecular function	201	1.71e-56
extracellular region	Hs	cellular component	224	8.89e-62
extracellular space	Hs	cellular component	212	1.32e-58
cytoplasm	Hs	cellular component	212	1.32e-58
endoplasmic reticulum	Hs	cellular component	201	1.71e-56
endoplasmic reticulum membrane	Hs	cellular component	201	1.71e-56
rough endoplasmic reticulum	Hs	cellular component	212	1.32e-58
cytosol	Hs	cellular component	212	1.32e-58
plasma membrane	Hs	cellular component	224	8.89e-62
peptidase activity	Hs	molecular function	224	8.89e-62
serine-type peptidase activity	Hs	molecular function	224	8.89e-62
membrane	Hs	cellular component	224	8.89e-62
integral component of membrane	Hs	cellular component	201	1.71e-56
hydrolase activity	Hs	molecular function	224	8.89e-62
sodium channel regulator activity	Hs	molecular function	201	1.71e-56
axon	Hs	cellular component	224	8.89e-62
dendrite	Hs	cellular component	224	8.89e-62
cytoplasmic vesicle	Hs	cellular component	224	8.89e-62
neuronal cell body	Hs	cellular component	201	1.71e-56
synaptic cleft	Hs	cellular component	224	8.89e-62
terminal bouton	Hs	cellular component	224	8.89e-62
synapse	Hs	cellular component	224	8.89e-62

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
serine-type endopeptidase activity	SMART	molecular function	6.9E-94
scavenger receptor activity	Pfam	molecular function	9.5E-22
protein binding	PRINTS	molecular function	2.1E-17
proteolysis	SMART	biological process	6.9E-94
membrane	SMART	cellular component	1.0E-33