Login
Help

GENE CARD

Submit your Data

  1. > 

Gene Card

Best human hits

NCSTN

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000165

Gene Model ID

KH2012:KH.C1.1147

Location

KhC1:8995363..9005050

Transcript Models and Sequences

  KH2012:KH.C1.1147.v1.A.SL1-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

cien163676

Plate: VES95_L15

cien170072

Plate: VES96_H14

Gene collection 1 (N. Satoh)

1 result

cieg040j10

Plate: R1CiGC22a09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
Nicastrin PANTHER Nicastrin
Nicastrin Pfam Nicastrin

GOSlim

28 results

GO Term Annotation Origin Type
endopeptidase activity Orthology molecular function
protein binding Orthology molecular function
lysosomal membrane Orthology cellular component
endoplasmic reticulum Orthology cellular component
Golgi apparatus Orthology cellular component
plasma membrane Orthology cellular component
integral component of plasma membrane Orthology cellular component
focal adhesion Orthology cellular component
proteolysis Orthology biological process
Notch signaling pathway Orthology biological process
peptidase activity Orthology molecular function
membrane Orthology cellular component
integral component of membrane Orthology cellular component
cytoplasmic vesicle Orthology cellular component
melanosome Orthology cellular component
positive regulation of apoptotic process Orthology biological process
positive regulation of catalytic activity Orthology biological process
extracellular exosome Orthology cellular component
gene expression Orthology biological process
intracellular organelle part Orthology cellular component
organelle membrane Orthology cellular component
protein metabolic process Orthology biological process
peptide metabolic process Orthology biological process
endomembrane system Orthology cellular component
cell surface receptor signaling pathway Orthology biological process
cell proliferation Orthology biological process
plasma membrane part Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
endopeptidase activity Hs molecular function
protein binding Hs molecular function
lysosomal membrane Hs cellular component
endoplasmic reticulum Hs cellular component
Golgi apparatus Hs cellular component
plasma membrane Hs cellular component
integral component of plasma membrane Hs cellular component
focal adhesion Hs cellular component
proteolysis Hs biological process
membrane protein ectodomain proteolysis Hs biological process
Notch signaling pathway Hs biological process
Notch receptor processing Hs biological process
peptidase activity Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
protein processing Hs biological process
cytoplasmic vesicle membrane Hs cellular component
membrane protein intracellular domain proteolysis Hs biological process
cytoplasmic vesicle Hs cellular component
amyloid-beta formation Hs biological process
azurophil granule membrane Hs cellular component
melanosome Hs cellular component
amyloid precursor protein metabolic process Hs biological process
amyloid precursor protein catabolic process Hs biological process
positive regulation of apoptotic process Hs biological process
positive regulation of catalytic activity Hs biological process
ephrin receptor signaling pathway Hs biological process
amyloid-beta metabolic process Hs biological process
epithelial cell proliferation Hs biological process
extracellular exosome Hs cellular component
gamma-secretase complex Hs cellular component

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
endopeptidase activity Hs molecular function 329 1.71e-102
protein binding Hs molecular function 329 1.71e-102
lysosomal membrane Hs cellular component 329 1.71e-102
endoplasmic reticulum Hs cellular component 329 1.71e-102
Golgi apparatus Hs cellular component 329 1.71e-102
plasma membrane Hs cellular component 329 1.71e-102
integral component of plasma membrane Hs cellular component 329 1.71e-102
focal adhesion Hs cellular component 329 1.71e-102
peptidase activity Hs molecular function 329 1.71e-102
membrane Hs cellular component 329 1.71e-102
integral component of membrane Hs cellular component 329 1.71e-102
cytoplasmic vesicle membrane Hs cellular component 329 1.71e-102
cytoplasmic vesicle Hs cellular component 329 1.71e-102
azurophil granule membrane Hs cellular component 329 1.71e-102
melanosome Hs cellular component 329 1.71e-102
extracellular exosome Hs cellular component 329 1.71e-102
gamma-secretase complex Hs cellular component 329 1.71e-102

GO (InterProScan)

2 results

GO Term Analysis Type e-value
integral component of membrane PANTHER cellular component 4.7E-179
protein processing PANTHER biological process 4.7E-179

Back to Top