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GENE CARD

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Gene Card

Best human hits

DLL1; JAG2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000184

Gene Model ID

KH2012:KH.C1.1165

Location

KhC1:2289918..2299641

Transcript Models and Sequences

  KH2012:KH.C1.1165.v1.A.ND1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000009113
ENSEMBL ENSCING00000013769
NCBI Reference Sequence XM_002124939.4
Collections

Gene collection 1 (N. Satoh)

2 results

cicl055e22

Plate: R1CiGC14f13

cibd018f15

Plate: R1CiGC37b10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
EGF-like_dom ProSiteProfiles EGF-like domain
EGF-like_dom SMART EGF-like domain
EGF-like_CS ProSitePatterns EGF-like, conserved site
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain
EGF-type_Asp/Asn_hydroxyl_site ProSitePatterns EGF-type aspartate/asparagine hydroxylation site
ZP_dom ProSiteProfiles Zona pellucida domain
EGF-like_dom Pfam EGF-like domain

GOSlim

17 results

GO Term Annotation Origin Type
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
adherens junction Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
cell junction Blast cellular component
cytoplasmic vesicle Blast cellular component
membrane raft Blast cellular component
receptor binding Blast molecular function
molecular function regulator Blast molecular function
regulation of signal transduction Blast biological process
signaling receptor activity Blast molecular function
transcription factor binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Notch binding Hs molecular function 117 2.28e-27
calcium ion binding Hs molecular function 117 2.28e-27
protein binding Hs molecular function 117 2.28e-27
extracellular region Hs cellular component 117 2.28e-27
plasma membrane Hs cellular component 117 2.28e-27
integral component of plasma membrane Hs cellular component 117 2.28e-27
adherens junction Hs cellular component 117 2.28e-27
growth factor activity Hs molecular function 117 2.35e-27
membrane Hs cellular component 117 2.28e-27
integral component of membrane Hs cellular component 117 2.28e-27
apical plasma membrane Hs cellular component 117 2.28e-27
cell junction Hs cellular component 117 2.28e-27
Tat protein binding Hs molecular function 117 2.28e-27
cytoplasmic vesicle Hs cellular component 117 2.28e-27
membrane raft Hs cellular component 117 2.28e-27
scaffold protein binding Hs molecular function 117 2.28e-27

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding SMART molecular function 2.2E-6

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