Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

CD207; CLEC4F; MRC2

Unique Gene ID

Cirobu.g00000215

Gene Model ID

KH2012:KH.C1.1193

Location

KhC1:4959991..4962970

Transcript Models and Sequences

  KH2012:KH.C1.1193.v1.A.ND1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000023592
Collections

Gene collection 1 (N. Satoh)

2 results

cilv008d15

Plate: R1CiGC25l07

cilv021j03

Plate: R1CiGC26j04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
C-type_lectin-like/link_sf Gene3D C-type lectin-like/link domain superfamily
C-type_lectin-like Pfam C-type lectin-like
C-type_lectin-like ProSiteProfiles C-type lectin-like
C-type_lectin-like SMART C-type lectin-like
CTDL_fold SUPERFAMILY C-type lectin fold

GOSlim

15 results

GO Term Annotation Origin Type
transmembrane signaling receptor activity Blast molecular function
protein binding Blast molecular function
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
focal adhesion Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
macromolecular complex binding Blast molecular function
small molecule binding Blast molecular function
cytoplasmic vesicle Blast cellular component
binding Blast molecular function
whole membrane Blast cellular component
intracellular organelle part Blast cellular component
bounding membrane of organelle Blast cellular component
early endosome Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transmembrane signaling receptor activity Hs molecular function 48.5 4.15e-06
protein binding Hs molecular function 51.2 3.08e-07
collagen binding Hs molecular function 48.5 4.15e-06
mannose binding Hs molecular function 51.2 3.08e-07
plasma membrane Hs cellular component 51.2 3.08e-07
integral component of plasma membrane Hs cellular component 48.5 4.15e-06
focal adhesion Hs cellular component 48.5 4.15e-06
membrane Hs cellular component 52.8 1.20e-07
integral component of membrane Hs cellular component 52.8 1.20e-07
endocytic vesicle Hs cellular component 51.2 3.08e-07
carbohydrate binding Hs molecular function 52.8 1.20e-07
clathrin-coated endocytic vesicle membrane Hs cellular component 51.2 3.08e-07
early endosome membrane Hs cellular component 51.2 3.08e-07

GO (InterProScan)

No result

GO Term Analysis Type e-value