Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 

Gene Card

Best human hits

GMPR; IMPDH1; IMPDH2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000414

Gene Model ID

KH2012:KH.C1.2

Location

KhC1:6997555..7008837

Transcript Models and Sequences

  KH2012:KH.C1.2.v1.A.SL1-2
KH2012:KH.C1.2.v1.A.SL2-2
KH2012:KH.C1.2.v1.A.SL4-2
KH2012:KH.C1.2.v2.A.SL1-3
KH2012:KH.C1.2.v2.A.SL2-3
KH2012:KH.C1.2.v2.A.SL4-3
KH2012:KH.C1.2.v3.A.SL1-1
KH2012:KH.C1.2.v3.A.SL2-1
KH2012:KH.C1.2.v3.A.SL4-1
KH2012:KH.C1.2.v4.A.nonSL5-1
KH2012:KH.C1.2.v4.A.SL3-1
KH2012:KH.C1.2.v5.A.nonSL5-2
KH2012:KH.C1.2.v5.A.SL3-2
KH2012:KH.C1.2.v6.A.nonSL5-3
KH2012:KH.C1.2.v6.A.SL3-3

External Database Gene Card

External database links

5 results

Database Gene ID
ENSEMBL ENSCING00000007078
ENSEMBL ENSCING00000018596
NCBI Reference Sequence XM_002121108.3
NCBI Reference Sequence XM_009864122.1
NCBI Reference Sequence XM_018813505.1
Collections

Gateway full ORF

2 results

cien102307

Plate: VES86_K06

cien50373

Plate: VES78_G04

Gene collection 1 (N. Satoh)

1 result

cieg019i04

Plate: R1CiGC18d05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
CBS_dom ProSiteProfiles CBS domain
IMP_DH_GMPRt CDD IMP dehydrogenase/GMP reductase
CBS_dom SMART CBS domain
Aldolase_TIM Gene3D Aldolase-type TIM barrel
IMP_DH_GMPRt Pfam IMP dehydrogenase/GMP reductase
CBS_dom Pfam CBS domain
IMP_DH PIRSF Inosine-5'-monophosphate dehydrogenase
IMP_DH/GMP_Rdtase_CS ProSitePatterns IMP dehydrogenase / GMP reductase, conserved site
IMP_DH TIGRFAM Inosine-5'-monophosphate dehydrogenase
IMP_DH Hamap Inosine-5'-monophosphate dehydrogenase

GOSlim

27 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
nucleic acid binding Orthology molecular function
DNA binding Orthology molecular function
RNA binding Orthology molecular function
catalytic activity Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
membrane Orthology cellular component
metal ion binding Orthology molecular function
oxidation-reduction process Orthology biological process
extracellular exosome Orthology cellular component
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
peroxisome Orthology cellular component
bounding membrane of organelle Orthology cellular component
phosphate-containing compound metabolic process Orthology biological process
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
lysosome Orthology cellular component
vacuolar part Orthology cellular component
protein homooligomerization Orthology biological process
animal organ development Orthology biological process
macromolecular complex Blast cellular component

GO (Orthology)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
catalytic activity Hs molecular function
IMP dehydrogenase activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
peroxisomal membrane Hs cellular component
cytosol Hs cellular component
purine nucleotide biosynthetic process Hs biological process
GMP biosynthetic process Hs biological process
GTP biosynthetic process Hs biological process
circadian rhythm Hs biological process
purine ribonucleoside monophosphate biosynthetic process Hs biological process
membrane Hs cellular component
oxidoreductase activity Hs molecular function
secretory granule lumen Hs cellular component
azurophil granule lumen Hs cellular component
metal ion binding Hs molecular function
protein homotetramerization Hs biological process
oxidation-reduction process Hs biological process
retina development in camera-type eye Hs biological process
extracellular exosome Hs cellular component
ficolin-1-rich granule lumen Hs cellular component

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 826 0.0
nucleic acid binding Hs molecular function 811 0.0
DNA binding Hs molecular function 826 0.0
RNA binding Hs molecular function 826 0.0
catalytic activity Hs molecular function 826 0.0
GMP reductase activity Hs molecular function 123 8.13e-31
IMP dehydrogenase activity Hs molecular function 826 0.0
protein binding Hs molecular function 826 0.0
extracellular region Hs cellular component 826 0.0
nucleus Hs cellular component 826 0.0
cytoplasm Hs cellular component 826 0.0
peroxisomal membrane Hs cellular component 826 0.0
cytosol Hs cellular component 826 0.0
membrane Hs cellular component 826 0.0
oxidoreductase activity Hs molecular function 826 0.0
secretory granule lumen Hs cellular component 826 0.0
azurophil granule lumen Hs cellular component 811 0.0
metal ion binding Hs molecular function 826 0.0
extracellular exosome Hs cellular component 826 0.0
GMP reductase complex Hs cellular component 123 8.13e-31
ficolin-1-rich granule lumen Hs cellular component 826 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
catalytic activity Gene3D molecular function 2.2E-193
IMP dehydrogenase activity PIRSF molecular function 5.0E-196
purine nucleotide biosynthetic process PIRSF biological process 5.0E-196
oxidoreductase activity ProSitePatterns molecular function
oxidation-reduction process Pfam biological process 2.8E-31

Back to Top