Aniseed - Gene card

Gene Card

Best human hits

ILKAP; PPM1A; PPM1E

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000435

Gene Model ID

KH2012:KH.C1.218

Location

KhC1:2635123..2642936

Transcript Models and Sequences

KH2012:KH.C1.218.v1.A.ND1-1
KH2012:KH.C1.218.v1.A.SL2-1
KH2012:KH.C1.218.v1.A.SL3-1
KH2012:KH.C1.218.v1.A.SL4-1
KH2012:KH.C1.218.v1.A.SL5-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000002414
NCBI Reference Sequence	XM_002120190.4
NCBI Reference Sequence	XM_009863887.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg003d03

Plate: R1CiGC15f24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
PP2C	PANTHER	Protein phosphatase 2C family
PPM-type_phosphatase_dom	ProSiteProfiles	PPM-type phosphatase domain
PP2C_BS	ProSitePatterns	PPM-type phosphatase, divalent cation binding
PPM-type_phosphatase_dom	CDD	PPM-type phosphatase domain
PPM-type_dom_sf	Gene3D	PPM-type phosphatase domain superfamily
PPM-type_dom_sf	SUPERFAMILY	PPM-type phosphatase domain superfamily
PPM-type_phosphatase_dom	Pfam	PPM-type phosphatase domain
PPM-type_phosphatase_dom	SMART	PPM-type phosphatase domain

GOSlim

21 results

GO Term	Annotation Origin	Type
magnesium ion binding	Blast	molecular function
catalytic activity	Orthology	molecular function
signal transducer activity	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Blast	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
cytosol	Orthology	cellular component
plasma membrane	Blast	cellular component
protein dephosphorylation	Orthology	biological process
membrane	Blast	cellular component
kinase activity	Orthology	molecular function
phosphorylation	Orthology	biological process
hydrolase activity	Orthology	molecular function
macromolecular complex	Blast	cellular component
cation binding	Orthology	molecular function
metal ion binding	Orthology	molecular function
cell surface receptor signaling pathway	Orthology	biological process
transition metal ion binding	Blast	molecular function

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
phosphoprotein phosphatase activity	Hs	molecular function
protein serine/threonine phosphatase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
protein dephosphorylation	Hs	biological process
integrin-mediated signaling pathway	Hs	biological process
kinase activity	Hs	molecular function
phosphorylation	Hs	biological process
hydrolase activity	Hs	molecular function
cation binding	Hs	molecular function
metal ion binding	Hs	molecular function

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
magnesium ion binding	Hs	molecular function	119	7.98e-30
catalytic activity	Hs	molecular function	392	2.07e-135
phosphoprotein phosphatase activity	Hs	molecular function	392	2.07e-135
protein serine/threonine phosphatase activity	Hs	molecular function	392	2.07e-135
signal transducer activity	Hs	molecular function	119	7.98e-30
protein binding	Hs	molecular function	392	2.07e-135
nucleus	Hs	cellular component	392	2.07e-135
nucleoplasm	Hs	cellular component	392	2.07e-135
nucleolus	Hs	cellular component	120	1.23e-29
cytoplasm	Hs	cellular component	392	2.07e-135
mitochondrion	Hs	cellular component	120	1.23e-29
cytosol	Hs	cellular component	392	2.07e-135
plasma membrane	Hs	cellular component	119	7.98e-30
membrane	Hs	cellular component	119	7.98e-30
kinase activity	Hs	molecular function	392	2.07e-135
hydrolase activity	Hs	molecular function	392	2.07e-135
manganese ion binding	Hs	molecular function	119	7.98e-30
macromolecular complex	Hs	cellular component	120	1.23e-29
calmodulin-dependent protein phosphatase activity	Hs	molecular function	119	7.98e-30
cation binding	Hs	molecular function	392	2.07e-135
metal ion binding	Hs	molecular function	392	2.07e-135
R-SMAD binding	Hs	molecular function	119	7.98e-30

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
catalytic activity	CDD	molecular function	5.51591E-85
protein serine/threonine phosphatase activity	PANTHER	molecular function	6.2E-127
protein dephosphorylation	PANTHER	biological process	6.2E-127
cation binding	ProSitePatterns	molecular function