Gene Card
Best human hits
BPTF; ING3; TAF3
Unique Gene ID
Cirobu.g00000489
Gene Model ID
KH2012:KH.C1.267
Location
KhC1:3007404..3020530
External database links
3 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000002701 |
| ENSEMBL | ENSCING00000023423 |
| NCBI Reference Sequence | XM_002126919.3 |
Gene collection 1 (N. Satoh)
3 results
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_PHD-finger | ProSiteProfiles | Zinc finger, PHD-finger |
| Znf_PHD | SMART | Zinc finger, PHD-type |
| Znf_FYVE_PHD | SUPERFAMILY | Zinc finger, FYVE/PHD-type |
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| TAF3 | PANTHER | Transcription initiation factor TFIID subunit 3 |
| Znf_PHD-finger | Pfam | Zinc finger, PHD-finger |
| Zinc_finger_PHD-type_CS | ProSitePatterns | Zinc finger, PHD-type, conserved site |
| Histone-fold | Gene3D | Histone-fold |
| BTP | SMART | Bromodomain associated domain |
| BTP | Pfam | Bromodomain associated domain |
GOSlim
21 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| transcription factor binding | Blast | molecular function |
| nuclear membrane | Blast | cellular component |
| neuron projection | Blast | cellular component |
| sequence-specific DNA binding | Blast | molecular function |
| cell body | Blast | cellular component |
| metal ion binding | Blast | molecular function |
| protein heterodimerization activity | Blast | molecular function |
| perinuclear region of cytoplasm | Blast | cellular component |
| extracellular exosome | Blast | cellular component |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| nuclear lumen | Blast | cellular component |
| nucleoplasm part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| organelle organization | Blast | biological process |
| transferase activity | Blast | molecular function |
| cellular protein modification process | Blast | biological process |
| nucleoside-triphosphatase activity | Blast | molecular function |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
25 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nuclear chromatin | Hs | cellular component | 55.1 | 1.84e-07 |
| Swr1 complex | Hs | cellular component | 54.3 | 1.73e-07 |
| p53 binding | Hs | molecular function | 129 | 1.50e-30 |
| histone acetyltransferase activity | Hs | molecular function | 54.3 | 1.73e-07 |
| protein binding | Hs | molecular function | 129 | 1.50e-30 |
| nucleus | Hs | cellular component | 129 | 1.50e-30 |
| nucleoplasm | Hs | cellular component | 129 | 1.50e-30 |
| transcription factor TFIID complex | Hs | cellular component | 129 | 1.50e-30 |
| cytoplasm | Hs | cellular component | 55.1 | 1.84e-07 |
| DNA-dependent ATPase activity | Hs | molecular function | 55.1 | 1.84e-07 |
| transcription factor binding | Hs | molecular function | 55.1 | 1.84e-07 |
| NURF complex | Hs | cellular component | 55.1 | 1.84e-07 |
| dendrite | Hs | cellular component | 55.1 | 1.84e-07 |
| nuclear membrane | Hs | cellular component | 129 | 1.50e-30 |
| Piccolo NuA4 histone acetyltransferase complex | Hs | cellular component | 54.3 | 1.73e-07 |
| methylated histone binding | Hs | molecular function | 55.1 | 1.84e-07 |
| NuA4 histone acetyltransferase complex | Hs | cellular component | 54.3 | 1.73e-07 |
| neuron projection | Hs | cellular component | 55.1 | 1.84e-07 |
| sequence-specific DNA binding | Hs | molecular function | 55.1 | 1.84e-07 |
| cell body | Hs | cellular component | 55.1 | 1.84e-07 |
| metal ion binding | Hs | molecular function | 129 | 1.50e-30 |
| protein heterodimerization activity | Hs | molecular function | 129 | 1.50e-30 |
| Set1C/COMPASS complex | Hs | cellular component | 55.1 | 1.84e-07 |
| perinuclear region of cytoplasm | Hs | cellular component | 55.1 | 1.84e-07 |
| extracellular exosome | Hs | cellular component | 55.1 | 1.84e-07 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| transcription factor TFIID complex | PANTHER | cellular component | 1.4E-153 |
| protein heterodimerization activity | Gene3D | molecular function | 5.6E-16 |
