Aniseed - Gene card

Gene Card

Best human hits

FBLN1; FBLN2; HMCN1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000502

Gene Model ID

KH2012:KH.C1.279

Location

KhC1:6052344..6072662

Transcript Models and Sequences

KH2012:KH.C1.279.v1.A.SL2-1
KH2012:KH.C1.279.v1.A.SL3-1
KH2012:KH.C1.279.v2.A.SL2-2
KH2012:KH.C1.279.v2.A.SL3-2
KH2012:KH.C1.279.v3.A.SL1-2
KH2012:KH.C1.279.v4.A.SL1-1
KH2012:KH.C1.279.v5.A.SL4-2

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000007940
ENSEMBL	ENSCING00000012739
NCBI Reference Sequence	XM_009859124.2
NCBI Reference Sequence	XM_018812964.1

Collections

Gateway full ORF

3 results

Gene collection 1 (N. Satoh)

3 results

citb083h12

Plate: R1CiGC46f11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
Anaphylatoxin/fibulin	ProSiteProfiles	Anaphylatoxin/fibulin
EGF-like_dom	ProSiteProfiles	EGF-like domain
Anaphylatoxin/fibulin	SMART	Anaphylatoxin/fibulin
EGF-like_Ca-bd_dom	Pfam	EGF-like calcium-binding domain
EGF-like_CS	ProSitePatterns	EGF-like, conserved site
Growth_fac_rcpt_cys_sf	SUPERFAMILY	Growth factor receptor cysteine-rich domain superfamily
Anaphylatoxin/fibulin	ProSitePatterns	Anaphylatoxin/fibulin
EGF-like_dom	SMART	EGF-like domain
EGF_Ca-bd_CS	ProSitePatterns	EGF-like calcium-binding, conserved site
EGF-type_Asp/Asn_hydroxyl_site	ProSitePatterns	EGF-type aspartate/asparagine hydroxylation site
EGF-like_Ca-bd_dom	SMART	EGF-like calcium-binding domain

GOSlim

33 results

GO Term	Annotation Origin	Type
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
cytoplasm	Blast	cellular component
protein C-terminus binding	Orthology	molecular function
cell junction	Blast	cellular component
extracellular matrix organization	Orthology	biological process
identical protein binding	Orthology	molecular function
macromolecular complex binding	Orthology	molecular function
cell division	Orthology	biological process
extracellular exosome	Orthology	cellular component
extracellular vesicle	Orthology	cellular component
protein phosphorylation	Orthology	biological process
extracellular region part	Orthology	cellular component
structural molecule activity	Orthology	molecular function
macromolecular complex	Orthology	cellular component
cell adhesion	Orthology	biological process
peptidase activity	Orthology	molecular function
positive regulation of hydrolase activity	Orthology	biological process
enzyme binding	Orthology	molecular function
enzyme activator activity	Orthology	molecular function
binding	Orthology	molecular function
intracellular signal transduction	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
protein metabolic process	Orthology	biological process
blood coagulation	Orthology	biological process
cell morphogenesis involved in differentiation	Orthology	biological process
cell motility	Orthology	biological process
negative regulation of cell proliferation	Orthology	biological process
cell periphery	Blast	cellular component
cytoplasmic part	Blast	cellular component
plasma membrane region	Blast	cellular component

GO (Orthology)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of protein phosphorylation	Hs	biological process
fibronectin binding	Hs	molecular function
extracellular matrix structural constituent	Hs	molecular function
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
fibrinogen complex	Hs	cellular component
proteinaceous extracellular matrix	Hs	cellular component
basement membrane	Hs	cellular component
extracellular space	Hs	cellular component
negative regulation of cell adhesion	Hs	biological process
protein C-terminus binding	Hs	molecular function
positive regulation of cell-substrate adhesion	Hs	biological process
positive regulation of peptidase activity	Hs	biological process
viral process	Hs	biological process
peptidase activator activity	Hs	molecular function
extracellular matrix organization	Hs	biological process
extracellular matrix	Hs	cellular component
identical protein binding	Hs	molecular function
macromolecular complex binding	Hs	molecular function
extracellular matrix binding	Hs	molecular function
fibrinogen binding	Hs	molecular function
extracellular exosome	Hs	cellular component
negative regulation of ERK1 and ERK2 cascade	Hs	biological process
elastic fiber	Hs	cellular component
blood coagulation, fibrin clot formation	Hs	biological process
negative regulation of substrate adhesion-dependent cell spreading	Hs	biological process
extracellular vesicle	Hs	cellular component
negative regulation of cell motility	Hs	biological process
negative regulation of stem cell proliferation	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
fibronectin binding	Hs	molecular function	394	3.68e-120
extracellular matrix structural constituent	Hs	molecular function	394	3.68e-120
calcium ion binding	Hs	molecular function	394	3.68e-120
protein binding	Hs	molecular function	334	9.50e-95
extracellular region	Hs	cellular component	394	3.68e-120
fibrinogen complex	Hs	cellular component	394	3.68e-120
proteinaceous extracellular matrix	Hs	cellular component	394	3.68e-120
basement membrane	Hs	cellular component	394	3.68e-120
extracellular space	Hs	cellular component	394	3.68e-120
cytoplasm	Hs	cellular component	227	1.64e-59
cell cortex	Hs	cellular component	227	1.64e-59
protein C-terminus binding	Hs	molecular function	394	3.68e-120
peptidase activator activity	Hs	molecular function	394	3.68e-120
cell junction	Hs	cellular component	227	1.64e-59
extracellular matrix	Hs	cellular component	394	3.68e-120
cleavage furrow	Hs	cellular component	227	1.64e-59
identical protein binding	Hs	molecular function	394	3.68e-120
macromolecular complex binding	Hs	molecular function	394	3.68e-120
extracellular matrix binding	Hs	molecular function	334	9.50e-95
fibrinogen binding	Hs	molecular function	394	3.68e-120
extracellular exosome	Hs	cellular component	394	3.68e-120
elastic fiber	Hs	cellular component	394	3.68e-120
extracellular vesicle	Hs	cellular component	334	9.50e-95

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
calcium ion binding	SMART	molecular function	4.6E-12
extracellular region	SMART	cellular component	0.049