Aniseed - Gene card

Gene Card

Best human hits

SLC25A20; SLC25A29; SLC25A45

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000504

Gene Model ID

KH2012:KH.C1.280

Location

KhC1:8502253..8507178

Transcript Models and Sequences

KH2012:KH.C1.280.v1.A.SL1-1
KH2012:KH.C1.280.v1.A.SL2-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000019998
NCBI Reference Sequence	XM_002127520.4
NCBI Reference Sequence	XM_018812545.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cign063f03

Plate: R1CiGC42d24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Mitochondrial_sb/sol_carrier	Pfam	Mitochondrial substrate/solute carrier
Mitochondrial_sb/sol_carrier	ProSiteProfiles	Mitochondrial substrate/solute carrier
Mt_carrier_dom_sf	Gene3D	Mitochondrial carrier domain superfamily
Mit_carrier	PRINTS	Mitochondrial carrier protein
Mt_carrier_dom_sf	SUPERFAMILY	Mitochondrial carrier domain superfamily

GOSlim

9 results

GO Term	Annotation Origin	Type
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
cytosol	Blast	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
transmembrane transport	Orthology	biological process
organic substance transport	Orthology	biological process
cation transport	Orthology	biological process
ion transport	Orthology	biological process

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
high-affinity arginine transmembrane transporter activity	Hs	molecular function
high-affinity lysine transmembrane transporter activity	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial transport	Hs	biological process
acyl carnitine transport	Hs	biological process
amino acid transport	Hs	biological process
amino acid transmembrane transporter activity	Hs	molecular function
basic amino acid transmembrane transporter activity	Hs	molecular function
acyl carnitine transmembrane transporter activity	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
transmembrane transport	Hs	biological process
L-histidine transmembrane transport	Hs	biological process
acyl carnitine transmembrane transport	Hs	biological process
L-lysine transmembrane transport	Hs	biological process

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
high-affinity arginine transmembrane transporter activity	Hs	molecular function	295	5.62e-100
high-affinity lysine transmembrane transporter activity	Hs	molecular function	295	5.62e-100
carnitine:acyl carnitine antiporter activity	Hs	molecular function	179	4.84e-55
mitochondrion	Hs	cellular component	295	5.62e-100
mitochondrial inner membrane	Hs	cellular component	295	5.62e-100
cytosol	Hs	cellular component	179	4.84e-55
amino acid transmembrane transporter activity	Hs	molecular function	295	5.62e-100
basic amino acid transmembrane transporter activity	Hs	molecular function	295	5.62e-100
carnitine transmembrane transporter activity	Hs	molecular function	179	4.84e-55
acyl carnitine transmembrane transporter activity	Hs	molecular function	295	5.62e-100
membrane	Hs	cellular component	295	5.62e-100
integral component of membrane	Hs	cellular component	295	5.62e-100
transmembrane transporter activity	Hs	molecular function	182	4.76e-56

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
transmembrane transport	PRINTS	biological process	4.2E-6