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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S5...' > 

Gene Card

Best human hits

DNAJC1; DNAJC2; DNAJC21

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000513

Gene Model ID

KH2012:KH.C1.289

Location

KhC1:5098023..5103247

Transcript Models and Sequences

  KH2012:KH.C1.289.v1.A.ND1-1
KH2012:KH.C1.289.v1.A.nonSL2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000003953
NCBI Reference Sequence XM_002131396.3
Collections

Gateway full ORF

2 results

cien183716

Plate: VES98_P14

cien183815

Plate: VES98_K15

Gene collection 1 (N. Satoh)

2 results

citb7b13

Plate: R1CiGC29n21

cicl018j01

Plate: R1CiGC10b02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
Myb-like_dom ProSiteProfiles Myb-like domain
SANT/Myb CDD SANT/Myb domain
DnaJ_domain SMART DnaJ domain
SANT/Myb SMART SANT/Myb domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
DnaJ_domain CDD DnaJ domain
RAC_head Pfam Ribosome-associated complex head domain
J_dom_sf SUPERFAMILY Chaperone J-domain superfamily
J_dom_sf Gene3D Chaperone J-domain superfamily
DnaJ_domain ProSiteProfiles DnaJ domain
SANT/Myb Pfam SANT/Myb domain
DnaJ_domain Pfam DnaJ domain

GOSlim

32 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
nucleic acid binding Blast molecular function
DNA binding Orthology molecular function
chromatin binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Blast cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
cytosol Orthology cellular component
ribosome Blast cellular component
plasma membrane Blast cellular component
DNA replication Orthology biological process
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
zinc ion binding Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
organelle membrane Blast cellular component
nuclear membrane Orthology cellular component
intracellular membrane-bounded organelle Blast cellular component
positive regulation of transcription, DNA-templated Orthology biological process
metal ion binding Blast molecular function
nucleoside-triphosphatase regulator activity Orthology molecular function
positive regulation of hydrolase activity Orthology biological process
enzyme activator activity Orthology molecular function
organelle organization Orthology biological process
nucleoside-triphosphatase activity Orthology molecular function

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
ATPase activator activity Hs molecular function
DNA binding Hs molecular function
chromatin binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
DNA replication Hs biological process
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
Hsp70 protein binding Hs molecular function
nuclear membrane Hs cellular component
positive regulation of ATPase activity Hs biological process
histone binding Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
ubiquitin modification-dependent histone binding Hs molecular function

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 513 1.36e-176
ATPase activator activity Hs molecular function 513 1.36e-176
nucleic acid binding Hs molecular function 78.2 5.09e-15
DNA binding Hs molecular function 513 1.36e-176
chromatin binding Hs molecular function 513 1.36e-176
RNA binding Hs molecular function 513 1.36e-176
protein binding Hs molecular function 513 1.36e-176
nucleus Hs cellular component 513 1.36e-176
nucleoplasm Hs cellular component 513 1.36e-176
nucleolus Hs cellular component 78.2 5.09e-15
cytoplasm Hs cellular component 513 1.36e-176
endoplasmic reticulum Hs cellular component 61.2 8.94e-10
endoplasmic reticulum membrane Hs cellular component 61.2 8.94e-10
cytosol Hs cellular component 513 1.36e-176
ribosome Hs cellular component 78.2 5.09e-15
plasma membrane Hs cellular component 61.2 8.94e-10
zinc ion binding Hs molecular function 78.2 5.09e-15
membrane Hs cellular component 61.2 8.94e-10
integral component of membrane Hs cellular component 61.2 8.94e-10
Hsp70 protein binding Hs molecular function 513 1.36e-176
organelle membrane Hs cellular component 61.2 8.94e-10
nuclear membrane Hs cellular component 513 1.36e-176
histone binding Hs molecular function 513 1.36e-176
intracellular membrane-bounded organelle Hs cellular component 61.2 8.94e-10
metal ion binding Hs molecular function 78.2 5.09e-15
chaperone binding Hs molecular function 61.2 8.94e-10
ubiquitin modification-dependent histone binding Hs molecular function 513 1.36e-176

GO (InterProScan)

1 result

GO Term Analysis Type e-value
DNA binding SUPERFAMILY molecular function 1.5E-12

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