Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000005592

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

citb060i01

Plate: R1CiGC46c07

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
HBS1-like_N	Pfam	HBS1-like protein, N-terminal
TF_GTP-bd_dom	PRINTS	Transcription factor, GTP-binding domain
TF_GTP-bd_dom	Pfam	Transcription factor, GTP-binding domain
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
HBS1-like_N_sf	SUPERFAMILY	HBS1-like protein, N-terminal domain superfamily
HBS1-like_N	ProDom	HBS1-like protein, N-terminal
TF_GTP-bd_dom	ProSiteProfiles	Transcription factor, GTP-binding domain
Transl_B-barrel_sf	SUPERFAMILY	Translation protein, beta-barrel domain superfamily
Transl_elong_EFTu/EF1A_C	Pfam	Translation elongation factor EFTu/EF1A, C-terminal
Transl_elong_EF1A/Init_IF2_C	SUPERFAMILY	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal

GOSlim

35 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Orthology	molecular function
GTPase activity	Orthology	molecular function
protein binding	Orthology	molecular function
calmodulin binding	Blast	molecular function
GTP binding	Orthology	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
intracellular	Orthology	cellular component
nucleus	Blast	cellular component
nucleolus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Orthology	cellular component
plasma membrane	Blast	cellular component
signal transduction	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
protein kinase binding	Blast	molecular function
neuronal cell body	Blast	cellular component
myelin sheath	Blast	cellular component
extracellular exosome	Orthology	cellular component
regulation of gene expression	Orthology	biological process
nuclear-transcribed mRNA catabolic process	Orthology	biological process
cytoplasmic part	Blast	cellular component
macromolecular complex	Blast	cellular component
cell periphery	Blast	cellular component
cytoskeletal part	Blast	cellular component
cell projection membrane	Blast	cellular component
cell leading edge	Blast	cellular component
intracellular organelle part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
membrane part	Blast	cellular component
lysosomal membrane	Blast	cellular component

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
translation elongation factor activity	Hs	molecular function
GTPase activity	Hs	molecular function
protein binding	Hs	molecular function
GTP binding	Hs	molecular function
intracellular	Hs	cellular component
cytosol	Hs	cellular component
translation	Hs	biological process
translational elongation	Hs	biological process
signal transduction	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
tRNA binding	Hs	molecular function	312	9.88e-99
nucleotide binding	Hs	molecular function	639	0.0
RNA binding	Hs	molecular function	312	9.88e-99
translation elongation factor activity	Hs	molecular function	639	0.0
GTPase activity	Hs	molecular function	639	0.0
protein binding	Hs	molecular function	639	0.0
calmodulin binding	Hs	molecular function	312	9.88e-99
GTP binding	Hs	molecular function	639	0.0
extracellular region	Hs	cellular component	312	9.88e-99
extracellular space	Hs	cellular component	312	9.88e-99
intracellular	Hs	cellular component	639	0.0
nucleus	Hs	cellular component	312	9.88e-99
nucleolus	Hs	cellular component	312	9.88e-99
cytoplasm	Hs	cellular component	312	9.88e-99
cytosol	Hs	cellular component	639	0.0
eukaryotic translation elongation factor 1 complex	Hs	cellular component	312	9.88e-99
plasma membrane	Hs	cellular component	312	9.88e-99
translation factor activity, RNA binding	Hs	molecular function	307	5.49e-97
membrane	Hs	cellular component	639	0.0
integral component of membrane	Hs	cellular component	639	0.0
protein kinase binding	Hs	molecular function	312	9.88e-99
cortical actin cytoskeleton	Hs	cellular component	312	9.88e-99
ruffle membrane	Hs	cellular component	312	9.88e-99
secretory granule lumen	Hs	cellular component	312	9.88e-99
neuronal cell body	Hs	cellular component	307	5.49e-97
myelin sheath	Hs	cellular component	312	9.88e-99
extracellular exosome	Hs	cellular component	639	0.0
cytoplasmic side of lysosomal membrane	Hs	cellular component	312	9.88e-99
ficolin-1-rich granule lumen	Hs	cellular component	312	9.88e-99

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
GTPase activity	Pfam	molecular function	1.0E-43
GTP binding	Pfam	molecular function	1.0E-43

Gene Card

Best human hits

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Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences