Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000007759
NCBI Reference Sequence	XM_002120508.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg032a10

Plate: R1CiGC20d04

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

16 results

IPR Term	Analysis	Definition
Znf_TFIIS	ProSitePatterns	Zinc finger, TFIIS-type
TFIIS_cen_dom	SMART	Transcription elongation factor S-II, central domain
TFIIS/LEDGF_dom_sf	Gene3D	TFIIS/LEDGF domain superfamily
TFIIS_cen_dom_sf	Gene3D	Transcription elongation factor S-II, central domain superfamily
TFIIS/CRSP70_N_sub	SMART	Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
TFIIS_cen_dom	ProSiteProfiles	Transcription elongation factor S-II, central domain
TFIIS_cen_dom	Pfam	Transcription elongation factor S-II, central domain
Znf_TFIIS	ProSiteProfiles	Zinc finger, TFIIS-type
TF_IIS-typ	PIRSF	Transcription elongation factor, IIS-type
TFIIS_N	Pfam	Transcription factor IIS, N-terminal
TFSII	TIGRFAM	Transcription elongation factor, TFIIS
Znf_TFIIS	Pfam	Zinc finger, TFIIS-type
TFIIS/LEDGF_dom_sf	SUPERFAMILY	TFIIS/LEDGF domain superfamily
TFIIS_N	ProSiteProfiles	Transcription factor IIS, N-terminal
Znf_TFIIS	SMART	Zinc finger, TFIIS-type
TFIIS_cen_dom_sf	SUPERFAMILY	Transcription elongation factor S-II, central domain superfamily

GOSlim

17 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
DNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
transcription from RNA polymerase II promoter	Orthology	biological process
zinc ion binding	Orthology	molecular function
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
RNA binding	Orthology	molecular function
regulation of gene expression	Orthology	biological process
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
DNA repair	Orthology	biological process

GO (Orthology)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleic acid binding	Hs	molecular function
DNA binding	Hs	molecular function
translation elongation factor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor TFIID complex	Hs	cellular component
nucleolus	Hs	cellular component
transcription-coupled nucleotide-excision repair	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
transcription elongation from RNA polymerase II promoter	Hs	biological process
translational elongation	Hs	biological process
transcription elongation factor complex	Hs	cellular component
zinc ion binding	Hs	molecular function
regulation of DNA-templated transcription, elongation	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	295	3.79e-100
DNA binding	Hs	molecular function	295	3.79e-100
translation elongation factor activity	Hs	molecular function	295	3.79e-100
protein binding	Hs	molecular function	295	3.79e-100
nucleus	Hs	cellular component	295	3.79e-100
nucleoplasm	Hs	cellular component	295	3.79e-100
transcription factor TFIID complex	Hs	cellular component	295	3.79e-100
nucleolus	Hs	cellular component	295	3.79e-100
transcription elongation factor complex	Hs	cellular component	290	4.64e-98
zinc ion binding	Hs	molecular function	295	3.79e-100
metal ion binding	Hs	molecular function	295	3.79e-100

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
nucleic acid binding	TIGRFAM	molecular function	4.2E-92
nucleus	TIGRFAM	cellular component	4.2E-92
transcription, DNA-templated	TIGRFAM	biological process	4.2E-92
regulation of transcription, DNA-templated	TIGRFAM	biological process	4.2E-92
zinc ion binding	SMART	molecular function	7.2E-19

Gene Card

Best human hits

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Unique Gene ID

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Transcript Models and Sequences