Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 
  3. > 
  4. > 

Gene Card

Best human hits

PRELID2; PRELID3A; PRELID3B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000923

Gene Model ID

KH2012:KH.C1.663

Location

KhC1:9318389..9325498

Transcript Models and Sequences

  KH2012:KH.C1.663.v1.A.SL1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000012442
ENSEMBL ENSCING00000024206
NCBI Reference Sequence XM_002124761.4
Collections

Gateway full ORF

2 results

cien103198

Plate: VES86_D11

cien162755

Plate: VES95_E11

Gene collection 1 (N. Satoh)

2 results

cieg044m01

Plate: R1CiGC22p07

cieg055o23

Plate: R1CiGC24b01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
PRELI/MSF1_dom ProSiteProfiles PRELI/MSF1 domain
PRELI/MSF1_dom Pfam PRELI/MSF1 domain
Slowmo/Ups PANTHER Slowmo/Ups family

GOSlim

6 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
mitochondrion Orthology cellular component
mitochondrial envelope Orthology cellular component
intracellular organelle lumen Orthology cellular component
organic substance transport Orthology biological process
ion transport Orthology biological process

GO (Orthology)

6 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
mitochondrion Hs cellular component
mitochondrial intermembrane space Hs cellular component
lipid transport Hs biological process
phospholipid transport Hs biological process
phosphatidic acid transporter activity Hs molecular function

GO (Blast)

4 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
protein binding Hs molecular function 133 3.40e-39
mitochondrion Hs cellular component 158 8.22e-49
mitochondrial intermembrane space Hs cellular component 158 8.22e-49
phosphatidic acid transporter activity Hs molecular function 158 8.22e-49

GO (InterProScan)

1 result

GO Term Analysis Type e-value
mitochondrial intermembrane space PANTHER cellular component 7.5E-51

Back to Top