Aniseed - Gene card

Gene Card

Best human hits

PSTK; XPO7

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000941

Gene Model ID

KH2012:KH.C1.68

Location

KhC1:1358683..1360345

Transcript Models and Sequences

KH2012:KH.C1.68.v1.A.ND1-1
KH2012:KH.C1.68.v1.A.SL2-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000018427
NCBI Reference Sequence	XM_002120949.3
NCBI Reference Sequence	XM_009863838.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl077a21

Plate: R1CiGC39o02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
P-loop_NTPase	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolase
KTI12/PSTK	Pfam	Protein KTI12/L-seryl-tRNA(Sec) kinase

GOSlim

18 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
binding	Blast	molecular function
protein binding	Blast	molecular function
ATP binding	Orthology	molecular function
intracellular	Blast	cellular component
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
mitochondrion	Orthology	cellular component
kinase activity	Orthology	molecular function
phosphorylation	Orthology	biological process
transferase activity	Orthology	molecular function
RNA binding	Orthology	molecular function
regulation of gene expression	Orthology	biological process
RNA biosynthetic process	Orthology	biological process
intracellular transport	Blast	biological process
nuclear envelope	Blast	cellular component
macromolecular complex	Blast	cellular component
enzyme binding	Blast	molecular function

GO (Orthology)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
tRNA binding	Hs	molecular function
nucleotide binding	Hs	molecular function
selenocysteine incorporation	Hs	biological process
ATP binding	Hs	molecular function
mitochondrion	Hs	cellular component
translation	Hs	biological process
kinase activity	Hs	molecular function
phosphorylation	Hs	biological process
transferase activity	Hs	molecular function
selenocysteinyl-tRNA(Sec) biosynthetic process	Hs	biological process

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
tRNA binding	Hs	molecular function	102	1.12e-24
nucleotide binding	Hs	molecular function	102	1.12e-24
nuclear export signal receptor activity	Hs	molecular function	38.5	0.005
binding	Hs	molecular function	38.5	0.005
protein binding	Hs	molecular function	38.5	0.005
ATP binding	Hs	molecular function	102	1.12e-24
intracellular	Hs	cellular component	38.5	0.005
nucleus	Hs	cellular component	38.5	0.005
nuclear pore	Hs	cellular component	38.5	0.005
cytoplasm	Hs	cellular component	38.5	0.005
mitochondrion	Hs	cellular component	102	1.12e-24
Ran GTPase binding	Hs	molecular function	38.5	0.005
kinase activity	Hs	molecular function	102	1.12e-24
transferase activity	Hs	molecular function	102	1.12e-24

GO (InterProScan)