Aniseed - Gene card

Gene Card

Best human hits

RFK

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000968

Gene Model ID

KH2012:KH.C1.703

Location

KhC1:5009865..5012314

Transcript Models and Sequences

KH2012:KH.C1.703.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000019287

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg005c20

Plate: R1CiGC16o09

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Riboflavin_kinase_dom_sf	Gene3D	Riboflavin kinase domain superfamily
Riboflavin_kinase_dom_sf	SUPERFAMILY	Riboflavin kinase domain superfamily
Riboflavin_kinase_bac/euk	SMART	Riboflavin kinase domain, bacterial/eukaryotic
Riboflavin_kinase_bac/euk	Pfam	Riboflavin kinase domain, bacterial/eukaryotic
Riboflavin_kinase	PANTHER	Riboflavin kinase

GOSlim

13 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
cytosol	Orthology	cellular component
apoptotic process	Orthology	biological process
kinase activity	Orthology	molecular function
phosphorylation	Orthology	biological process
transferase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
phosphotransferase activity, alcohol group as acceptor	Orthology	molecular function
cellular metabolic process	Orthology	biological process

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
cytosol	Hs	cellular component
apoptotic process	Hs	biological process
riboflavin kinase activity	Hs	molecular function
riboflavin biosynthetic process	Hs	biological process
kinase activity	Hs	molecular function
phosphorylation	Hs	biological process
transferase activity	Hs	molecular function
metal ion binding	Hs	molecular function
reactive oxygen species metabolic process	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	211	9.25e-71
protein binding	Hs	molecular function	211	9.25e-71
ATP binding	Hs	molecular function	211	9.25e-71
cytoplasm	Hs	cellular component	211	9.25e-71
mitochondrion	Hs	cellular component	211	9.25e-71
cytosol	Hs	cellular component	211	9.25e-71
riboflavin kinase activity	Hs	molecular function	211	9.25e-71
kinase activity	Hs	molecular function	211	9.25e-71
transferase activity	Hs	molecular function	211	9.25e-71
metal ion binding	Hs	molecular function	211	9.25e-71

GO (InterProScan)