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Gene Card

Best human hits

MAP4; MAPT

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00000997

Gene Model ID

KH2012:KH.C1.73

Location

KhC1:9579508..9601049

Transcript Models and Sequences

  KH2012:KH.C1.73.v1.A.SL1-1
KH2012:KH.C1.73.v1.A.SL3-1
KH2012:KH.C1.73.v2.A.SL1-1
KH2012:KH.C1.73.v2.A.SL3-1
KH2012:KH.C1.73.v3.A.SL2-1
KH2012:KH.C1.73.v4.A.SL2-1
KH2012:KH.C1.73.v5.A.SL1-1
KH2012:KH.C1.73.v5.A.SL3-1
KH2012:KH.C1.73.v6.R.ND4-1
KH2012:KH.C1.73.v7.A.SL2-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

cien57282

Plate: VES79_F07

cien200465

Plate: VES101_I10

Gene collection 1 (N. Satoh)

1 result

cieg001i24

Plate: R1CiGC15h01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
MAP_tubulin-bd_rpt ProSitePatterns Microtubule associated protein, tubulin-binding repeat
MAP_tubulin-bd_rpt ProSiteProfiles Microtubule associated protein, tubulin-binding repeat
MAP_tubulin-bd_rpt Pfam Microtubule associated protein, tubulin-binding repeat

GOSlim

90 results

GO Term Annotation Origin Type
DNA binding Orthology molecular function
double-stranded DNA binding Orthology molecular function
RNA binding Orthology molecular function
actin binding Orthology molecular function
structural molecule activity Blast molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
intracellular Orthology cellular component
nucleus Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
microtubule Orthology cellular component
plasma membrane Orthology cellular component
cell-cell signaling Orthology biological process
microtubule binding Orthology molecular function
negative regulation of gene expression Orthology biological process
microtubule cytoskeleton Orthology cellular component
tubulin binding Orthology molecular function
membrane Orthology cellular component
nuclear speck Orthology cellular component
enzyme binding Orthology molecular function
protein kinase binding Orthology molecular function
axon Orthology cellular component
neuron projection development Orthology biological process
somatodendritic compartment Orthology cellular component
identical protein binding Orthology molecular function
protein homodimerization activity Orthology molecular function
cell projection Orthology cellular component
neuron projection Blast cellular component
neuronal cell body Orthology cellular component
sequence-specific DNA binding Orthology molecular function
cell body Orthology cellular component
generation of neurons Orthology biological process
protein oligomerization Orthology biological process
extracellular exosome Blast cellular component
microtubule-based process Orthology biological process
organelle organization Orthology biological process
cellular process Orthology biological process
immune system process Orthology biological process
defense response Orthology biological process
sequence-specific double-stranded DNA binding Orthology molecular function
cytoskeletal part Orthology cellular component
macromolecular complex Orthology cellular component
cellular protein modification process Orthology biological process
endopeptidase activity Orthology molecular function
positive regulation of hydrolase activity Orthology biological process
positive regulation of apoptotic process Orthology biological process
nervous system process Orthology biological process
regulation of molecular function Orthology biological process
regulation of signal transduction Orthology biological process
signaling receptor activity Orthology molecular function
regulation of cellular metabolic process Orthology biological process
RNA metabolic process Orthology biological process
cell projection part Orthology cellular component
microtubule-based movement Orthology biological process
intracellular transport Orthology biological process
cytoplasmic part Orthology cellular component
neuron development Orthology biological process
central nervous system development Orthology biological process
cell projection membrane Orthology cellular component
cell leading edge Orthology cellular component
nuclear lumen Orthology cellular component
cytoskeletal protein binding Orthology molecular function
cellular response to stress Orthology biological process
response to oxidative stress Orthology biological process
anion binding Orthology molecular function
intracellular non-membrane-bounded organelle Orthology cellular component
postsynapse Orthology cellular component
axonogenesis Orthology biological process
receptor binding Orthology molecular function
molecular function regulator Orthology molecular function
cell development Orthology biological process
neurogenesis Orthology biological process
chemical synaptic transmission Orthology biological process
regulation of signaling Orthology biological process
cellular component organization Orthology biological process
intracellular signal transduction Orthology biological process
macromolecular complex binding Orthology molecular function
anatomical structure morphogenesis Orthology biological process
intracellular part Orthology cellular component
neuron part Orthology cellular component
positive regulation of cell death Orthology biological process
protein localization Orthology biological process
cellular protein localization Orthology biological process
protein metabolic process Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
plasma membrane region Blast cellular component
organelle Blast cellular component

GO (Orthology)

91 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
microtubule cytoskeleton organization Hs biological process
microglial cell activation Hs biological process
DNA binding Hs molecular function
AT DNA binding Hs molecular function
double-stranded DNA binding Hs molecular function
single-stranded DNA binding Hs molecular function
RNA binding Hs molecular function
actin binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
microtubule associated complex Hs cellular component
plasma membrane Hs cellular component
internal protein amino acid acetylation Hs biological process
activation of cysteine-type endopeptidase activity involved in apoptotic process Hs biological process
cell-cell signaling Hs biological process
memory Hs biological process
microtubule binding Hs molecular function
regulation of receptor activity Hs biological process
regulation of autophagy Hs biological process
negative regulation of gene expression Hs biological process
microtubule cytoskeleton Hs cellular component
tubulin binding Hs molecular function
membrane Hs cellular component
rRNA metabolic process Hs biological process
nuclear speck Hs cellular component
SH3 domain binding Hs molecular function
axonal transport of mitochondrion Hs biological process
enzyme binding Hs molecular function
protein kinase binding Hs molecular function
central nervous system neuron development Hs biological process
axon Hs cellular component
dendrite Hs cellular component
growth cone Hs cellular component
axolemma Hs cellular component
protein binding, bridging Hs molecular function
regulation of microtubule polymerization or depolymerization Hs biological process
regulation of microtubule polymerization Hs biological process
positive regulation of microtubule polymerization Hs biological process
cytoplasmic microtubule organization Hs biological process
neuron projection development Hs biological process
stress granule assembly Hs biological process
apolipoprotein binding Hs molecular function
nuclear periphery Hs cellular component
dynactin binding Hs molecular function
cellular response to heat Hs biological process
cellular response to reactive oxygen species Hs biological process
phosphatidylinositol binding Hs molecular function
cytoplasmic ribonucleoprotein granule Hs cellular component
somatodendritic compartment Hs cellular component
identical protein binding Hs molecular function
protein homodimerization activity Hs molecular function
cell projection Hs cellular component
neuronal cell body Hs cellular component
dendritic spine Hs cellular component
sequence-specific DNA binding Hs molecular function
cell body Hs cellular component
tubulin complex Hs cellular component
positive regulation of axon extension Hs biological process
microtubule polymerization Hs biological process
receptor ligand activity Hs molecular function
astrocyte activation Hs biological process
regulation of synaptic plasticity Hs biological process
intracellular distribution of mitochondria Hs biological process
generation of neurons Hs biological process
synapse organization Hs biological process
regulation of calcium-mediated signaling Hs biological process
chaperone binding Hs molecular function
protein oligomerization Hs biological process
protein phosphatase 2A binding Hs molecular function
Hsp90 protein binding Hs molecular function
regulation of microtubule cytoskeleton organization Hs biological process
lipoprotein particle binding Hs molecular function
regulation of mitochondrial fission Hs biological process
neurofibrillary tangle Hs cellular component
supramolecular fiber organization Hs biological process
histone-dependent DNA binding Hs molecular function
microtubule lateral binding Hs molecular function
positive regulation of neuron death Hs biological process
positive regulation of protein localization to synapse Hs biological process
phosphatidylinositol bisphosphate binding Hs molecular function
positive regulation of cellular protein localization Hs biological process
axon cytoplasm Hs cellular component
amyloid fibril formation Hs biological process
regulation of response to DNA damage stimulus Hs biological process

GO (Blast)

60 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
DNA binding Hs molecular function 154 7.85e-39
AT DNA binding Hs molecular function 154 7.85e-39
double-stranded DNA binding Hs molecular function 154 7.85e-39
single-stranded DNA binding Hs molecular function 154 7.85e-39
RNA binding Hs molecular function 159 6.14e-40
actin binding Hs molecular function 154 7.85e-39
structural molecule activity Hs molecular function 159 6.14e-40
protein binding Hs molecular function 159 6.14e-40
extracellular region Hs cellular component 154 7.85e-39
intracellular Hs cellular component 154 7.85e-39
nucleus Hs cellular component 154 7.85e-39
cytoplasm Hs cellular component 159 6.14e-40
mitochondrion Hs cellular component 154 7.85e-39
cytosol Hs cellular component 159 6.14e-40
cytoskeleton Hs cellular component 159 6.14e-40
microtubule Hs cellular component 159 6.14e-40
microtubule associated complex Hs cellular component 159 6.14e-40
plasma membrane Hs cellular component 159 6.14e-40
axoneme Hs cellular component 159 6.14e-40
microtubule binding Hs molecular function 159 6.14e-40
postsynaptic density Hs cellular component 159 6.14e-40
microtubule cytoskeleton Hs cellular component 159 6.14e-40
tubulin binding Hs molecular function 159 6.14e-40
membrane Hs cellular component 154 7.85e-39
nuclear speck Hs cellular component 154 7.85e-39
SH3 domain binding Hs molecular function 154 7.85e-39
enzyme binding Hs molecular function 154 7.85e-39
protein kinase binding Hs molecular function 154 7.85e-39
axon Hs cellular component 154 7.85e-39
dendrite Hs cellular component 154 7.85e-39
growth cone Hs cellular component 154 7.85e-39
axolemma Hs cellular component 154 7.85e-39
protein binding, bridging Hs molecular function 154 7.85e-39
apolipoprotein binding Hs molecular function 154 7.85e-39
nuclear periphery Hs cellular component 154 7.85e-39
dynactin binding Hs molecular function 154 7.85e-39
phosphatidylinositol binding Hs molecular function 154 7.85e-39
cytoplasmic ribonucleoprotein granule Hs cellular component 154 7.85e-39
somatodendritic compartment Hs cellular component 154 7.85e-39
identical protein binding Hs molecular function 154 7.85e-39
protein homodimerization activity Hs molecular function 154 7.85e-39
cell projection Hs cellular component 154 7.85e-39
neuron projection Hs cellular component 159 6.14e-40
neuronal cell body Hs cellular component 154 7.85e-39
dendritic spine Hs cellular component 154 7.85e-39
sequence-specific DNA binding Hs molecular function 154 7.85e-39
cell body Hs cellular component 154 7.85e-39
tubulin complex Hs cellular component 154 7.85e-39
receptor ligand activity Hs molecular function 154 7.85e-39
chaperone binding Hs molecular function 154 7.85e-39
protein phosphatase 2A binding Hs molecular function 154 7.85e-39
Hsp90 protein binding Hs molecular function 154 7.85e-39
extracellular exosome Hs cellular component 159 6.14e-40
lipoprotein particle binding Hs molecular function 154 7.85e-39
mitotic spindle Hs cellular component 159 6.14e-40
neurofibrillary tangle Hs cellular component 154 7.85e-39
histone-dependent DNA binding Hs molecular function 154 7.85e-39
microtubule lateral binding Hs molecular function 154 7.85e-39
phosphatidylinositol bisphosphate binding Hs molecular function 154 7.85e-39
axon cytoplasm Hs cellular component 154 7.85e-39

GO (InterProScan)

1 result

GO Term Analysis Type e-value
tubulin binding Pfam molecular function 4.5E-16

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