Aniseed - Gene card

Gene Card

Best human hits

LAMTOR5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001033

Gene Model ID

KH2012:KH.C1.762

Location

KhC1:6129679..6131762

Transcript Models and Sequences

KH2012:KH.C1.762.v1.A.SL1-1
KH2012:KH.C1.762.v1.A.SL2-1
KH2012:KH.C1.762.v1.A.SL3-1
KH2012:KH.C1.762.v1.A.SL4-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000024693

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg027c22

Plate: R1CiGC19n04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
LAMTOR5	PANTHER	Ragulator complex protein LAMTOR5
LAMTOR5	PRINTS	Ragulator complex protein LAMTOR5
LAMTOR5	Pfam	Ragulator complex protein LAMTOR5

GOSlim

20 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
lysosome	Orthology	cellular component
lysosomal membrane	Orthology	cellular component
cytosol	Orthology	cellular component
negative regulation of apoptotic process	Orthology	biological process
enzyme binding	Orthology	molecular function
molecular function regulator	Orthology	molecular function
cellular component organization	Orthology	biological process
regulation of cellular metabolic process	Orthology	biological process
intracellular signal transduction	Orthology	biological process
positive regulation of signal transduction	Orthology	biological process
endopeptidase activity	Orthology	molecular function
protein localization to organelle	Orthology	biological process
cellular response to organic substance	Orthology	biological process
bounding membrane of organelle	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
endosome	Orthology	cellular component
membrane raft	Orthology	cellular component

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
guanyl-nucleotide exchange factor activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
lysosome	Hs	cellular component
lysosomal membrane	Hs	cellular component
cytosol	Hs	cellular component
cell cycle arrest	Hs	biological process
regulation of cell size	Hs	biological process
response to virus	Hs	biological process
regulation of macroautophagy	Hs	biological process
viral genome replication	Hs	biological process
positive regulation of TOR signaling	Hs	biological process
protein complex scaffold activity	Hs	molecular function
negative regulation of apoptotic process	Hs	biological process
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process	Hs	biological process
protein localization to lysosome	Hs	biological process
cellular response to amino acid stimulus	Hs	biological process
Ragulator complex	Hs	cellular component

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
guanyl-nucleotide exchange factor activity	Hs	molecular function	53.9	2.30e-10
protein binding	Hs	molecular function	53.9	2.30e-10
cytoplasm	Hs	cellular component	53.9	2.30e-10
lysosome	Hs	cellular component	53.9	2.30e-10
lysosomal membrane	Hs	cellular component	53.9	2.30e-10
cytosol	Hs	cellular component	53.9	2.30e-10
protein complex scaffold activity	Hs	molecular function	53.9	2.30e-10
Ragulator complex	Hs	cellular component	53.9	2.30e-10

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
cytoplasm	Pfam	cellular component	6.8E-27
viral genome replication	Pfam	biological process	6.8E-27
negative regulation of apoptotic process	Pfam	biological process	6.8E-27
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process	Pfam	biological process	6.8E-27
Ragulator complex	Pfam	cellular component	6.8E-27