Aniseed - Gene card

Gene Card

Best human hits

TKT; TKTL1; TKTL2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00001053

Gene Model ID

KH2012:KH.C1.780

Location

KhC1:7957367..7959971

Transcript Models and Sequences

KH2012:KH.C1.780.v1.A.nonSL2-1
KH2012:KH.C1.780.v1.A.SL1-1
KH2012:KH.C1.780.v1.A.SL3-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000007581

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl058i02

Plate: R1CiGC15a17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Transketo_C/PFOR_II	Gene3D	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II
Transketo_C/PFOR_II	SUPERFAMILY	Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II
Transketolase_N	Pfam	Transketolase, N-terminal
Transketolase_BS	ProSitePatterns	Transketolase binding site
Transketolase_C	Pfam	Transketolase, C-terminal domain
Transketolase-like_Pyr-bd	Pfam	Transketolase-like, pyrimidine-binding domain
Transketolase-like_Pyr-bd	SMART	Transketolase-like, pyrimidine-binding domain
THDP-binding	SUPERFAMILY	Thiamin diphosphate-binding fold

GOSlim

22 results

GO Term	Annotation Origin	Type
catalytic activity	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
peroxisome	Orthology	cellular component
cytosol	Orthology	cellular component
metabolic process	Orthology	biological process
nuclear body	Orthology	cellular component
nuclear speck	Orthology	cellular component
transferase activity	Orthology	molecular function
vesicle	Orthology	cellular component
protein homodimerization activity	Orthology	molecular function
myelin sheath	Orthology	cellular component
metal ion binding	Orthology	molecular function
cofactor binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
organic substance metabolic process	Orthology	biological process
oxidation-reduction process	Orthology	biological process
phosphate-containing compound metabolic process	Orthology	biological process
cellular aromatic compound metabolic process	Orthology	biological process
cellular biosynthetic process	Orthology	biological process

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
transketolase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
peroxisome	Hs	cellular component
cytosol	Hs	cellular component
glucose catabolic process	Hs	biological process
pentose-phosphate shunt	Hs	biological process
thiamine metabolic process	Hs	biological process
metabolic process	Hs	biological process
pentose-phosphate shunt, non-oxidative branch	Hs	biological process
nuclear body	Hs	cellular component
nuclear speck	Hs	cellular component
transferase activity	Hs	molecular function
vesicle	Hs	cellular component
regulation of growth	Hs	biological process
protein homodimerization activity	Hs	molecular function
myelin sheath	Hs	cellular component
glyceraldehyde-3-phosphate biosynthetic process	Hs	biological process
metal ion binding	Hs	molecular function
cofactor binding	Hs	molecular function
extracellular exosome	Hs	cellular component

GO (Blast)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
catalytic activity	Hs	molecular function	736
transketolase activity	Hs	molecular function	736
protein binding	Hs	molecular function	736
nucleus	Hs	cellular component	612
nucleoplasm	Hs	cellular component	736
cytoplasm	Hs	cellular component	662
peroxisome	Hs	cellular component	736
cytosol	Hs	cellular component	736
nuclear body	Hs	cellular component	736
nuclear speck	Hs	cellular component	736
transferase activity	Hs	molecular function	736
vesicle	Hs	cellular component	736
protein homodimerization activity	Hs	molecular function	736
myelin sheath	Hs	cellular component	736
metal ion binding	Hs	molecular function	736
cofactor binding	Hs	molecular function	736
extracellular exosome	Hs	cellular component	736

GO (InterProScan)