Gene Card
Best human hits
YRDC
Unique Gene ID
Cirobu.g00001229
Gene Model ID
KH2012:KH.C1.940
Location
KhC1:7814358..7816147
Transcript Models and Sequences
KH2012:KH.C1.940.v1.A.SL2-1
KH2012:KH.C1.940.v2.A.SL1-1
KH2012:KH.C1.940.v2.A.SL3-1
Gateway full ORF
2 results
cien108879
Plate: VES87_J08
cien153461
Plate: VES94_K01
Gene collection 1 (N. Satoh)
2 results
citb9n24
Plate: R1CiGC30c15
cieg014n16
Plate: R1CiGC17p03
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
3 results
| IPR Term | Analysis | Definition |
|---|---|---|
| DHBP_synth_RibB-like_a/b_dom | SUPERFAMILY | DHBP synthase RibB-like alpha/beta domain superfamily |
| YrdC-like_dom | Pfam | YrdC-like domain |
| YrdC-like_dom | ProSiteProfiles | YrdC-like domain |
GOSlim
6 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| cytoplasm | Orthology | cellular component |
| mitochondrion | Orthology | cellular component |
| membrane | Orthology | cellular component |
| RNA binding | Orthology | molecular function |
| RNA processing | Orthology | biological process |
| transferase activity, transferring phosphorus-containing groups | Orthology | molecular function |
GO (Orthology)
8 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| tRNA binding | Hs | molecular function |
| tRNA threonylcarbamoyladenosine modification | Hs | biological process |
| double-stranded RNA binding | Hs | molecular function |
| cytoplasm | Hs | cellular component |
| mitochondrion | Hs | cellular component |
| regulation of translational fidelity | Hs | biological process |
| membrane | Hs | cellular component |
| nucleotidyltransferase activity | Hs | molecular function |
GO (Blast)
6 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| tRNA binding | Hs | molecular function | 180 | 1.40e-54 |
| double-stranded RNA binding | Hs | molecular function | 180 | 1.40e-54 |
| cytoplasm | Hs | cellular component | 180 | 1.40e-54 |
| mitochondrion | Hs | cellular component | 180 | 1.40e-54 |
| membrane | Hs | cellular component | 180 | 1.40e-54 |
| nucleotidyltransferase activity | Hs | molecular function | 180 | 1.40e-54 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| double-stranded RNA binding | Pfam | molecular function | 6.4E-40 |
